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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   PMEPCRA   methylesterase PCR A 
 ath-u.5   PMEPCRA   methylesterase PCR A 
 ath-r.7   PMEPCRA   methylesterase PCR A 
 ath-m.9   PMEPCRA   methylesterase PCR A 
 ath-e.2   PMEPCRA   methylesterase PCR A 
 ath-m.4.hor   PMEPCRA   methylesterase PCR A 
 ath-m.4.lig   PMEPCRA   methylesterase PCR A 
 ath-m.4.str   PMEPCRA   methylesterase PCR A 
 ath-m.4.tis   PMEPCRA   methylesterase PCR A 
 bra-r.6   103843236   pectinesterase/pectinesterase inhibitor 18 
 bna-r.1   106412069   pectinesterase/pectinesterase inhibitor 18-like 
 ghi-r.1   107961969   pectinesterase/pectinesterase inhibitor 
 ghi-r.1   107905947   pectinesterase 
 cit-r.1   102630292   pectinesterase-like 
 gma-u.5   100815836   pectinesterase 
 vvi-u.5   100253692   pectinesterase 
 ppo-u.5   18103429   pectinesterase 
 ppo-u.5   7485431   pectinesterase 
 mtr-u.5   11446388   pectinesterase 
 mtr-u.5   11440079   pectinesterase 
 mtr-u.5   11437869   pectinesterase 
 sly-u.5   PE1   pectinesterase 1 
 sly-u.5   101260197   pectinesterase 
 sot-r.1   102585483   pectinesterase 
 sot-r.1   102598327   pectinesterase 3 
 sot-r.1   PME1   pectin methyl esterase 
 nta-r.1   107766157   pectinesterase-like 
 nta-r.1   107819367   pectinesterase 
 nta-r.1   107796992   pectinesterase 2.1-like 
 osa-u.5   4325861   pectinesterase 
 tae-r.2   123062279   pectinesterase 
 tae-r.2   123079412   pectinesterase 
 sbi-r.1   8054729   pectinesterase 
 bdi-r.1   100826837   pectinesterase 

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Top 50 coexpressed genes to PMEPCRA (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PMEPCRA (ath-m.4.bio coexpression data)

CoexMap"837701"


athPMEPCRA | Entrez gene ID : 837701      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa tae sbi bdi zma cre hvu
Paralog 9 1 1 2 1 1 1 2 3 2 3 3 1 2 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
GO BP
GO:0042545 [list] [network] cell wall modification  (164 genes)  IEA  
GO:0009617 [list] [network] response to bacterium  (500 genes)  IEP  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0016020 [list] [network] membrane  (3740 genes)  HDA  
GO MF
GO:0030599 [list] [network] pectinesterase activity  (17 genes)  IDA  
Protein NP_001321758.1 [sequence] [blastp]
NP_172624.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  plas 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001321758.1)
E.R. 4,  chlo 2,  nucl 1,  cyto 1,  cyto_nucl 1,  chlo_mito 1  (predict for NP_172624.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001321758.1)
scret 4  (predict for NP_172624.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
PMEPCRA
ath-u.5
for
PMEPCRA
ath-r.7
for
PMEPCRA
ath-m.9
for
PMEPCRA
ath-e.2
for
PMEPCRA
ath-m.4.hor
for
PMEPCRA
ath-m.4.lig
for
PMEPCRA
ath-m.4.str
for
PMEPCRA
ath-m.4.tis
for
PMEPCRA
bra-r.6
for
103843236
bna-r.1
for
106412069
ghi-r.1
for
107961969
ghi-r.1
for
107905947
cit-r.1
for
102630292
gma-u.5
for
100815836
vvi-u.5
for
100253692
ppo-u.5
for
18103429
ppo-u.5
for
7485431
mtr-u.5
for
11446388
mtr-u.5
for
11440079
mtr-u.5
for
11437869
sly-u.5
for
PE1
sly-u.5
for
101260197
sot-r.1
for
102585483
sot-r.1
for
102598327
sot-r.1
for
PME1
nta-r.1
for
107766157
nta-r.1
for
107819367
nta-r.1
for
107796992
osa-u.5
for
4325861
tae-r.2
for
123062279
tae-r.2
for
123079412
sbi-r.1
for
8054729
bdi-r.1
for
100826837


Ortholog ID: 5195
Species ath bra bna ghi ghi cit gma vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa tae tae sbi bdi
Symbol PMEPCRA LOC103843236 LOC106412069 LOC107961969 LOC107905947 LOC102630292 LOC100815836 LOC100253692 LOC18103429 LOC7485431 LOC11446388 LOC11440079 LOC11437869 PE1 PME3 PME2.1 LOC102585483 PME1 LOC102598671 LOC107819367 LOC107796992 LOC107791187 LOC4325861 LOC123062279 LOC123079412 LOC8054729 LOC100826837
Function* methylesterase PCR A pectinesterase/pectinesterase inhibitor 18 pectinesterase/pectinesterase inhibitor 18-like pectinesterase/pectinesterase inhibitor pectinesterase pectinesterase-like pectinesterase pectinesterase pectinesterase pectinesterase pectinesterase pectinesterase pectinesterase pectinesterase 1 pectinesterase 3 pectin esterase pectinesterase pectin methyl esterase pectinesterase 2.1 pectinesterase pectinesterase 2.1-like pectinesterase 2.1-like pectinesterase pectinesterase pectinesterase pectinesterase pectinesterase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 5
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
sly02010 ABC transporters 2
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00040 Pentose and glucuronate interconversions 3
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 4
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 4
osa00620 Pyruvate metabolism 3
osa00040 Pentose and glucuronate interconversions 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
tae04517 IgSF CAM signaling 2
tae04518 Integrin signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837701 103843236 106412069 107961969 107905947 102630292 100815836 100253692 18103429 7485431 11446388 11440079 11437869 544090 101268487 544289 102585483 102577669 102598671 107819367 107796992 107791187 4325861 123062279 123079412 8054729 100826837
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