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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT1G11900   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107948993   pentatricopeptide repeat-containing protein At1g11900 
 ghi-r.1   107898936   pentatricopeptide repeat-containing protein At1g11900 
 cit-r.1   102613327   pentatricopeptide repeat-containing protein At1g11900 
 gma-u.5   100792544   pentatricopeptide repeat-containing protein At1g11900 
 vvi-u.5   100266136   pentatricopeptide repeat-containing protein At1g11900 
 ppo-u.5   7480109   pentatricopeptide repeat-containing protein At1g11900 
 ppo-u.5   7475036   pentatricopeptide repeat-containing protein At1g11900 
 mtr-u.5   25487599   pentatricopeptide repeat-containing protein At1g11900 
 mtr-u.5   11433859   pentatricopeptide repeat-containing protein At1g11900 
 sly-u.5   101257087   pentatricopeptide repeat-containing protein At1g11900 
 sot-r.1   102583235   pentatricopeptide repeat-containing protein At1g11900 
 nta-r.1   107818470   uncharacterized LOC107818470 
 nta-r.1   107832429   uncharacterized LOC107832429 
 osa-u.5   9270641   pentatricopeptide repeat-containing protein At1g11900 
 zma-u.5   100275714   uncharacterized LOC100275714 
 tae-r.2   123112011   pentatricopeptide repeat-containing protein At1g11900 
 tae-r.2   123180456   pentatricopeptide repeat-containing protein At1g11900 
 tae-r.2   123038257   pentatricopeptide repeat-containing protein At1g11900 
 hvu-r.1   123407334   pentatricopeptide repeat-containing protein At1g11900 
 sbi-r.1   8064149   pentatricopeptide repeat-containing protein At1g11900 
 bdi-r.1   100837167   pentatricopeptide repeat-containing protein At1g11900 

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Top 50 coexpressed genes to AT1G11900 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G11900 (ath-m.4.bio coexpression data)

CoexMap"837738"


athAT1G11900 | Entrez gene ID : 837738      
Species ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre bna
Paralog 6 2 1 1 1 2 2 1 1 2 1 1 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_172654.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  extr 2  (predict for NP_172654.2)
Subcellular
localization
TargetP
mito 4  (predict for NP_172654.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT1G11900
ath-m.9
for
AT1G11900
ath-m.4.hor
for
AT1G11900
ath-m.4.lig
for
AT1G11900
ath-m.4.str
for
AT1G11900
ath-m.4.tis
for
AT1G11900
ghi-r.1
for
107948993
ghi-r.1
for
107898936
cit-r.1
for
102613327
gma-u.5
for
100792544
vvi-u.5
for
100266136
ppo-u.5
for
7480109
ppo-u.5
for
7475036
mtr-u.5
for
25487599
mtr-u.5
for
11433859
sly-u.5
for
101257087
sot-r.1
for
102583235
nta-r.1
for
107818470
nta-r.1
for
107832429
osa-u.5
for
9270641
zma-u.5
for
100275714
tae-r.2
for
123112011
tae-r.2
for
123180456
tae-r.2
for
123038257
hvu-r.1
for
123407334
sbi-r.1
for
8064149
bdi-r.1
for
100837167


Ortholog ID: 9770
Species ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107948993 LOC107898936 LOC102613327 LOC100792544 LOC100266136 LOC7480109 LOC7475036 LOC25487599 LOC11433859 LOC101257087 LOC102583235 LOC107818470 LOC107832429 LOC9270641 LOC100275714 LOC123112011 LOC123180456 LOC123038257 LOC123407334 LOC8064149 LOC100837167
Function* pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 uncharacterized LOC107818470 uncharacterized LOC107832429 pentatricopeptide repeat-containing protein At1g11900 uncharacterized LOC100275714 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900 pentatricopeptide repeat-containing protein At1g11900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107948993 107898936 102613327 100792544 100266136 7480109 7475036 25487599 11433859 101257087 102583235 107818470 107832429 9270641 100275714 123112011 123180456 123038257 123407334 8064149 100837167
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