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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT1G12730   GPI transamidase subunit PIG-U 
 ath-u.5   AT1G12730   GPI transamidase subunit PIG-U 
 ath-r.7   AT1G12730   GPI transamidase subunit PIG-U 
 ath-m.9   AT1G12730   GPI transamidase subunit PIG-U 
 ath-e.2   AT1G12730   GPI transamidase subunit PIG-U 
 ath-m.4.hor   AT1G12730   GPI transamidase subunit PIG-U 
 ath-m.4.lig   AT1G12730   GPI transamidase subunit PIG-U 
 ath-m.4.str   AT1G12730   GPI transamidase subunit PIG-U 
 ath-m.4.tis   AT1G12730   GPI transamidase subunit PIG-U 
 ath-u.5   AT1G63110   GPI transamidase subunit PIG-U 
 bra-r.6   103838341   phosphatidylinositol glycan anchor biosynthesis class U protein 
 bna-r.1   106358559   phosphatidylinositol glycan anchor biosynthesis class U protein 
 bna-r.1   106366528   phosphatidylinositol glycan anchor biosynthesis class U protein 
 ghi-r.1   107934159   phosphatidylinositol glycan anchor biosynthesis class U protein 
 ghi-r.1   107928962   phosphatidylinositol glycan anchor biosynthesis class U protein 
 cit-r.1   102614446   uncharacterized LOC102614446 
 gma-u.5   100794102   phosphatidylinositol glycan anchor biosynthesis class U protein 
 gma-u.5   100777192   phosphatidylinositol glycan anchor biosynthesis class U protein 
 vvi-u.5   100261568   uncharacterized LOC100261568 
 ppo-u.5   7479340   uncharacterized LOC7479340 
 mtr-u.5   25493659   phosphatidylinositol glycan anchor biosynthesis class U protein 
 sly-u.5   101244104   phosphatidylinositol glycan anchor biosynthesis class U protein 
 sot-r.1   102580226   phosphatidylinositol glycan anchor biosynthesis class U protein 
 nta-r.1   107806967   uncharacterized LOC107806967 
 nta-r.1   107799307   uncharacterized LOC107799307 
 osa-u.5   4330366   uncharacterized LOC4330366 
 osa-u.5   107276856   uncharacterized LOC107276856 
 zma-u.5   100282184   GPI transamidase subunit PIG-U family protein 
 tae-r.2   123188018   phosphatidylinositol glycan anchor biosynthesis class U protein 
 tae-r.2   123052162   phosphatidylinositol glycan anchor biosynthesis class U protein 
 tae-r.2   123044279   phosphatidylinositol glycan anchor biosynthesis class U protein 
 hvu-r.1   123395087   phosphatidylinositol glycan anchor biosynthesis class U protein-like 
 hvu-r.1   123425388   phosphatidylinositol glycan anchor biosynthesis class U protein-like 
 sbi-r.1   8073195   phosphatidylinositol glycan anchor biosynthesis class U protein 
 bdi-r.1   100841308   phosphatidylinositol glycan anchor biosynthesis class U protein 
 cre-r.1   CHLRE_03g150400v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G12730 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G12730 (ath-m.4.bio coexpression data)

CoexMap"837829"


athAT1G12730 | Entrez gene ID : 837829      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 2 1 1 1 1 1 2 2 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00563 [list] [network] Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (29 genes)
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_563912.1 [sequence] [blastp]
NP_973813.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  plas 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_563912.1)
chlo 8,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_973813.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563912.1)
mito 4  (predict for NP_973813.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT1G12730
ath-u.5
for
AT1G12730
ath-r.7
for
AT1G12730
ath-m.9
for
AT1G12730
ath-e.2
for
AT1G12730
ath-m.4.hor
for
AT1G12730
ath-m.4.lig
for
AT1G12730
ath-m.4.str
for
AT1G12730
ath-m.4.tis
for
AT1G12730
ath-u.5
for
AT1G63110
bra-r.6
for
103838341
bna-r.1
for
106358559
bna-r.1
for
106366528
ghi-r.1
for
107934159
ghi-r.1
for
107928962
cit-r.1
for
102614446
gma-u.5
for
100794102
gma-u.5
for
100777192
vvi-u.5
for
100261568
ppo-u.5
for
7479340
mtr-u.5
for
25493659
sly-u.5
for
101244104
sot-r.1
for
102580226
nta-r.1
for
107806967
nta-r.1
for
107799307
osa-u.5
for
4330366
osa-u.5
for
107276856
zma-u.5
for
100282184
tae-r.2
for
123188018
tae-r.2
for
123052162
tae-r.2
for
123044279
hvu-r.1
for
123395087
hvu-r.1
for
123425388
sbi-r.1
for
8073195
bdi-r.1
for
100841308
cre-r.1
for
CHLRE_03g150400v5


Ortholog ID: 8692
Species ath ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu hvu sbi bdi cre
Symbol AT1G12730 AT1G63110 LOC103838341 LOC106358559 LOC106366528 LOC107934159 LOC107928962 LOC102614446 LOC100794102 LOC100777192 LOC100261568 LOC7479340 LOC25493659 LOC101244104 LOC102580226 LOC107806967 LOC107799307 LOC4330366 LOC107276856 LOC100282184 LOC123188018 LOC123052162 LOC123044279 LOC123395087 LOC123425388 LOC8073195 LOC100841308 CHLRE_03g150400v5
Function* GPI transamidase subunit PIG-U GPI transamidase subunit PIG-U phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein uncharacterized LOC102614446 phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein uncharacterized LOC100261568 uncharacterized LOC7479340 phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein uncharacterized LOC107806967 uncharacterized LOC107799307 uncharacterized LOC4330366 uncharacterized LOC107276856 GPI transamidase subunit PIG-U family protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein-like phosphatidylinositol glycan anchor biosynthesis class U protein-like phosphatidylinositol glycan anchor biosynthesis class U protein phosphatidylinositol glycan anchor biosynthesis class U protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 9
bna00513 Various types of N-glycan biosynthesis 7
bna04141 Protein processing in endoplasmic reticulum 5
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 8
bna00513 Various types of N-glycan biosynthesis 7
bna04141 Protein processing in endoplasmic reticulum 5
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi04144 Endocytosis 2
ghi00190 Oxidative phosphorylation 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 9
ghi04145 Phagosome 7
ghi04144 Endocytosis 4
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma01212 Fatty acid metabolism 3
gma04142 Lysosome 2
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 3
ppo00040 Pentose and glucuronate interconversions 2
ppo00052 Galactose metabolism 2
ppo00500 Starch and sucrose metabolism 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 4
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae04145 Phagosome 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 4
sbi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837829 842615 103838341 106358559 106366528 107934159 107928962 102614446 100794102 100777192 100261568 7479340 25493659 101244104 102580226 107806967 107799307 4330366 107276856 100282184 123188018 123052162 123044279 123395087 123425388 8073195 100841308 5721153
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