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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   LSMT-L   Rubisco methyltransferase family protein 
 ath-u.5   LSMT-L   Rubisco methyltransferase family protein 
 ath-r.7   LSMT-L   Rubisco methyltransferase family protein 
 ath-m.9   LSMT-L   Rubisco methyltransferase family protein 
 ath-e.2   LSMT-L   Rubisco methyltransferase family protein 
 ath-m.4.hor   LSMT-L   Rubisco methyltransferase family protein 
 ath-m.4.lig   LSMT-L   Rubisco methyltransferase family protein 
 ath-m.4.str   LSMT-L   Rubisco methyltransferase family protein 
 ath-m.4.tis   LSMT-L   Rubisco methyltransferase family protein 
 bna-r.1   106369122   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 bna-r.1   106415812   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 ghi-r.1   107910114   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 ghi-r.1   107887371   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 cit-r.1   102629962   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 gma-u.5   100818113   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 gma-u.5   100801721   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 vvi-u.5   100243771   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 ppo-u.5   7498187   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 mtr-u.5   25492966   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 sly-u.5   101259632   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 sot-r.1   102587278   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like 
 sot-r.1   102587919   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 nta-r.1   107778201   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 nta-r.1   107809813   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like 
 osa-u.5   9266797   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 zma-u.5   100382373   [Fructose-bisphosphate aldolase]-lysine N-methyltransferase chloroplastic 
 tae-r.2   123121680   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 tae-r.2   123114815   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 tae-r.2   123103906   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 hvu-r.1   123398338   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 sbi-r.1   8063304   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 bdi-r.1   100823096   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 cre-r.1   CHLRE_16g661350v5   uncharacterized protein 

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Top 50 coexpressed genes to LSMT-L (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LSMT-L (ath-m.4.bio coexpression data)

CoexMap"837964"


athLSMT-L | Entrez gene ID : 837964      
Species ath bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 9 2 2 1 2 1 1 1 1 2 2 1 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0018023 [list] [network] peptidyl-lysine trimethylation  (1 genes)  IDA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0016279 [list] [network] protein-lysine N-methyltransferase activity  (20 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_172856.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_172856.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_172856.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
LSMT-L
ath-u.5
for
LSMT-L
ath-r.7
for
LSMT-L
ath-m.9
for
LSMT-L
ath-e.2
for
LSMT-L
ath-m.4.hor
for
LSMT-L
ath-m.4.lig
for
LSMT-L
ath-m.4.str
for
LSMT-L
ath-m.4.tis
for
LSMT-L
bna-r.1
for
106369122
bna-r.1
for
106415812
ghi-r.1
for
107910114
ghi-r.1
for
107887371
cit-r.1
for
102629962
gma-u.5
for
100818113
gma-u.5
for
100801721
vvi-u.5
for
100243771
ppo-u.5
for
7498187
mtr-u.5
for
25492966
sly-u.5
for
101259632
sot-r.1
for
102587278
sot-r.1
for
102587919
nta-r.1
for
107778201
nta-r.1
for
107809813
osa-u.5
for
9266797
zma-u.5
for
100382373
tae-r.2
for
123121680
tae-r.2
for
123114815
tae-r.2
for
123103906
hvu-r.1
for
123398338
sbi-r.1
for
8063304
bdi-r.1
for
100823096
cre-r.1
for
CHLRE_16g661350v5


Ortholog ID: 9775
Species ath bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LSMT-L LOC106369122 LOC106415812 LOC107910114 LOC107887371 LOC102629962 LOC100818113 LOC100801721 LOC100243771 LOC7498187 LOC25492966 LOC101259632 LOC102587278 LOC102587919 LOC107778201 LOC107809813 LOC9266797 LOC100382373 LOC123121680 LOC123114815 LOC123103906 LOC123398338 LOC8063304 LOC100823096 CHLRE_16g661350v5
Function* Rubisco methyltransferase family protein fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic [Fructose-bisphosphate aldolase]-lysine N-methyltransferase chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna00030 Pentose phosphate pathway 3
bna00051 Fructose and mannose metabolism 3
bna00710 Carbon fixation by Calvin cycle 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi03430 Mismatch repair 2
ghi00750 Vitamin B6 metabolism 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo03010 Ribosome 3
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837964 106369122 106415812 107910114 107887371 102629962 100818113 100801721 100243771 7498187 25492966 101259632 102587278 102587919 107778201 107809813 9266797 100382373 123121680 123114815 123103906 123398338 8063304 100823096 5723427
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