ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.4.bio	CENP-C	centromere protein C
ath-u.5	CENP-C	centromere protein C
ath-r.7	CENP-C	centromere protein C
ath-m.9	CENP-C	centromere protein C
ath-e.2	CENP-C	centromere protein C
ath-m.4.hor	CENP-C	centromere protein C
ath-m.4.lig	CENP-C	centromere protein C
ath-m.4.str	CENP-C	centromere protein C
ath-m.4.tis	CENP-C	centromere protein C
bra-r.6	103872354	centromere protein C
bna-r.1	BNAA06G10310D	centromere protein C
bna-r.1	106452821	centromere protein C
ghi-r.1	121206099	centromere protein C
ghi-r.1	107891691	centromere protein C
ghi-r.1	107897234	centromere protein C
cit-r.1	102609595	centromere protein C
gma-u.5	547764	centromere protein C
gma-u.5	100778037	centromere protein C
vvi-u.5	100244530	centromere protein C
ppo-u.5	7475741	centromere protein C
ppo-u.5	7490988	centromere protein C
mtr-u.5	25502708	centromere protein C
mtr-u.5	11415045	centromere protein C
sly-u.5	543949	centromere protein C
sot-r.1	102577589	uncharacterized LOC102577589
nta-r.1	107803884	uncharacterized LOC107803884
nta-r.1	107763991	uncharacterized LOC107763991
osa-u.5	4326608	centromere protein C
zma-u.5	541777	CENPCA protein
zma-u.5	103631686	uncharacterized LOC103631686
zma-u.5	103631679	uncharacterized LOC103631679
tae-r.2	123078576	centromere protein C
tae-r.2	123061503	centromere protein C
tae-r.2	543165	centromere protein C
hvu-r.1	123443886	centromere protein C-like
hvu-r.1	123446264	uncharacterized LOC123446264
sbi-r.1	110433823	uncharacterized LOC110433823
bdi-r.1	100845382	centromere protein C
cre-r.1	CHLRE_02g079250v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000776 [list] [network] kinetochore	(19 genes)	IDA
GO:0000775 [list] [network] chromosome, centromeric region	(33 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM

GO MF

Protein

NP_173018.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_173018.2)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for NP_173018.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.bio for CENP-C	ath-u.5 for CENP-C	ath-r.7 for CENP-C	ath-m.9 for CENP-C	ath-e.2 for CENP-C	ath-m.4.hor for CENP-C	ath-m.4.lig for CENP-C	ath-m.4.str for CENP-C	ath-m.4.tis for CENP-C	bra-r.6 for 103872354	bna-r.1 for BNAA06G10310D	bna-r.1 for 106452821	ghi-r.1 for 121206099	ghi-r.1 for 107891691	ghi-r.1 for 107897234	cit-r.1 for 102609595	gma-u.5 for 547764	gma-u.5 for 100778037	vvi-u.5 for 100244530	ppo-u.5 for 7475741	ppo-u.5 for 7490988	mtr-u.5 for 25502708	mtr-u.5 for 11415045	sly-u.5 for 543949	sot-r.1 for 102577589	nta-r.1 for 107803884	nta-r.1 for 107763991	osa-u.5 for 4326608	zma-u.5 for 541777	zma-u.5 for 103631686	zma-u.5 for 103631679	tae-r.2 for 123078576	tae-r.2 for 123061503	tae-r.2 for 543165	hvu-r.1 for 123443886	hvu-r.1 for 123446264	sbi-r.1 for 110433823	bdi-r.1 for 100845382	cre-r.1 for CHLRE_02g079250v5

Ortholog

Ortholog ID: 6400

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CENP-C

Function^*

centromere protein C

uncharacterized LOC102577589

uncharacterized LOC107803884

uncharacterized LOC107763991

centromere protein C

CENPCA protein

uncharacterized LOC103631686

uncharacterized LOC103631679

centromere protein C

centromere protein C-like

uncharacterized LOC123446264

uncharacterized LOC110433823

centromere protein C

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3
bra03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	3
ghi04144	Endocytosis	2
ghi04814	Motor proteins	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	3
ghi04144	Endocytosis	2
ghi04814	Motor proteins	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	5
gma03440	Homologous recombination	3
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03440	Homologous recombination	3
gma03460	Fanconi anemia pathway	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	6
ppo03430	Mismatch repair	5
ppo03420	Nucleotide excision repair	3
ppo03440	Homologous recombination	3
ppo03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3
tae03082	ATP-dependent chromatin remodeling	3
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3
tae03082	ATP-dependent chromatin remodeling	3
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	2
bdi03410	Base excision repair	2
bdi03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

838135

103872354

106346647

106452821

121206099

107897234

107913930

102609595

547764

100778037

100244530

7475741

7490988

25502708

11415045

543949

102577589

107803884

107763991

4326608

541777

103631686

103631679

123078576

123061503

543165

123443886

123446264

110433823

100845382

5727270

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CENP-C (ath-m.4.bio coexpression data)

Top 50 enrichment test to CENP-C (ath-m.4.bio coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	1	2	3	1	2	1	2	2	1	1	2	1	3	3	2	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CENP-C (ath-m.4.bio coexpression data)

Top 50 enrichment test to CENP-C (ath-m.4.bio coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**