Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT1G53180   uncharacterized protein 
 ath-u.5   AT1G53180   uncharacterized protein 
 ath-r.7   AT1G53180   uncharacterized protein 
 ath-m.9   AT1G53180   uncharacterized protein 
 ath-e.2   AT1G53180   uncharacterized protein 
 ath-m.4.hor   AT1G53180   uncharacterized protein 
 ath-m.4.lig   AT1G53180   uncharacterized protein 
 ath-m.4.str   AT1G53180   uncharacterized protein 
 ath-m.4.tis   AT1G53180   uncharacterized protein 
 ath-u.5   AT3G15115   serine/arginine repetitive matrix protein 
 bra-r.6   103869954   uncharacterized LOC103869954 
 bra-r.6   103841677   uncharacterized LOC103841677 
 bra-r.6   103832688   uncharacterized LOC103832688 
 bna-r.1   111216082   uncharacterized LOC111216082 
 bna-r.1   111210800   uncharacterized LOC111210800 
 ghi-r.1   107939184   uncharacterized LOC107939184 
 ghi-r.1   107917755   uncharacterized LOC107917755 
 cit-r.1   102621220   hypothetical protein 
 gma-u.5   100527250   uncharacterized LOC100527250 
 gma-u.5   100803315   uncharacterized LOC100803315 
 mtr-u.5   25487296   uncharacterized LOC25487296 

close


Top 50 coexpressed genes to AT1G53180 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G53180 (ath-m.4.bio coexpression data)

CoexMap"841752"


athAT1G53180 | Entrez gene ID : 841752      
Species ath bra bna ghi cit gma mtr cre vvi ppo hvu nta tae bdi osa zma sly sot sbi
Paralog 10 3 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001321119.1 [sequence] [blastp]
NP_001321120.1 [sequence] [blastp]
NP_175726.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  plas 1,  cyto 1,  E.R._plas 1  (predict for NP_001321119.1)
vacu 4,  chlo 2,  E.R._vacu 2,  nucl 1  (predict for NP_001321120.1)
nucl 9  (predict for NP_175726.1)
Subcellular
localization
TargetP
other 9,  mito 4  (predict for NP_001321119.1)
other 7  (predict for NP_001321120.1)
other 7  (predict for NP_175726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT1G53180
ath-u.5
for
AT1G53180
ath-r.7
for
AT1G53180
ath-m.9
for
AT1G53180
ath-e.2
for
AT1G53180
ath-m.4.hor
for
AT1G53180
ath-m.4.lig
for
AT1G53180
ath-m.4.str
for
AT1G53180
ath-m.4.tis
for
AT1G53180
ath-u.5
for
AT3G15115
bra-r.6
for
103869954
bra-r.6
for
103841677
bra-r.6
for
103832688
bna-r.1
for
111216082
bna-r.1
for
111210800
ghi-r.1
for
107939184
ghi-r.1
for
107917755
cit-r.1
for
102621220
gma-u.5
for
100527250
gma-u.5
for
100803315
mtr-u.5
for
25487296


Ortholog ID: 11957
Species ath ath bra bra bra bna bna ghi ghi cit gma gma mtr
Symbol AT1G53180 AT3G15115 LOC103869954 LOC103841677 LOC103832688 LOC111210800 BNACNNG62480D LOC107939184 LOC107917755 LOC102621220 LOC100527250 LOC100803315 LOC25487296
Function* uncharacterized protein serine/arginine repetitive matrix protein uncharacterized LOC103869954 uncharacterized LOC103841677 uncharacterized LOC103832688 uncharacterized LOC111210800 uncharacterized BNACNNG62480D uncharacterized LOC107939184 uncharacterized LOC107917755 hypothetical protein uncharacterized LOC100527250 uncharacterized LOC100803315 uncharacterized LOC25487296
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 4
gma00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841752 820742 103869954 103841677 103832688 111210800 106369568 107939184 107917755 102621220 100527250 100803315 25487296
The preparation time of this page was 0.2 [sec].