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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100240988   suppressor protein SRP40 
 vvi-u.5   100240988   suppressor protein SRP40 
 vvi-m.5   100240988   suppressor protein SRP40 
 ath-u.5   AT5G57120   nucleolar/coiled-body phosphoprotein 
 gma-u.5   100819339   nucleolar and coiled-body phosphoprotein 1 
 gma-u.5   100793322   nucleolar and coiled-body phosphoprotein 1 
 bra-r.6   103851786   nucleolar and coiled-body phosphoprotein 1 
 ppo-u.5   7490485   suppressor protein SRP40 
 ppo-u.5   7474718   suppressor protein SRP40 
 mtr-u.5   11446015   suppressor protein SRP40 
 ghi-r.1   107931599   nucleolar and coiled-body phosphoprotein 1 
 ghi-r.1   107904306   nucleolar and coiled-body phosphoprotein 1 
 bna-r.1   106377539   nucleolar and coiled-body phosphoprotein 1 
 cit-r.1   102611567   uncharacterized LOC102611567 
 sly-u.5   101250131   suppressor protein SRP40 
 sot-r.1   102596645   suppressor protein SRP40 
 nta-r.1   107826104   uncharacterized LOC107826104 
 nta-r.1   107774819   uncharacterized LOC107774819 
 osa-u.5   4352781   uncharacterized LOC4352781 
 zma-u.5   100382414   uncharacterized LOC100382414 
 tae-r.2   123110319   suppressor protein SRP40 
 tae-r.2   123119353   suppressor protein SRP40 
 tae-r.2   123102172   suppressor protein SRP40 
 hvu-r.1   123400120   suppressor protein SRP40 
 sbi-r.1   110429688   suppressor protein SRP40 
 bdi-r.1   100842499   nucleolar and coiled-body phosphoprotein 1 
 cre-r.1   CHLRE_01g055400v5   uncharacterized protein 

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Top 50 coexpressed genes to 100240988 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100240988 (vvi-r.5 coexpression data)

CoexMap"100240988"


vviLOC100240988 | Entrez gene ID : 100240988    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 2 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010656880.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_010656880.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010656880.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100240988
vvi-u.5
for
100240988
vvi-m.5
for
100240988
ath-u.5
for
AT5G57120
gma-u.5
for
100819339
gma-u.5
for
100793322
bra-r.6
for
103851786
ppo-u.5
for
7490485
ppo-u.5
for
7474718
mtr-u.5
for
11446015
ghi-r.1
for
107931599
ghi-r.1
for
107904306
bna-r.1
for
106377539
cit-r.1
for
102611567
sly-u.5
for
101250131
sot-r.1
for
102596645
nta-r.1
for
107826104
nta-r.1
for
107774819
osa-u.5
for
4352781
zma-u.5
for
100382414
tae-r.2
for
123110319
tae-r.2
for
123119353
tae-r.2
for
123102172
hvu-r.1
for
123400120
sbi-r.1
for
110429688
bdi-r.1
for
100842499
cre-r.1
for
CHLRE_01g055400v5


Ortholog ID: 10402
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100240988 AT5G57120 LOC100819339 LOC100793322 LOC103851786 LOC7490485 LOC7474718 LOC11446015 LOC107931599 LOC107904306 LOC106377539 LOC102611567 LOC101250131 LOC102596645 LOC107826104 LOC107774819 LOC4352781 LOC100382414 LOC123110319 LOC123119353 LOC123102172 LOC123400120 LOC110429688 LOC100842499 CHLRE_01g055400v5
Function* suppressor protein SRP40 nucleolar/coiled-body phosphoprotein nucleolar and coiled-body phosphoprotein 1 nucleolar and coiled-body phosphoprotein 1 nucleolar and coiled-body phosphoprotein 1 suppressor protein SRP40 suppressor protein SRP40 suppressor protein SRP40 nucleolar and coiled-body phosphoprotein 1 nucleolar and coiled-body phosphoprotein 1 nucleolar and coiled-body phosphoprotein 1 uncharacterized LOC102611567 suppressor protein SRP40 suppressor protein SRP40 uncharacterized LOC107826104 uncharacterized LOC107774819 uncharacterized LOC4352781 uncharacterized LOC100382414 suppressor protein SRP40 suppressor protein SRP40 suppressor protein SRP40 suppressor protein SRP40 suppressor protein SRP40 nucleolar and coiled-body phosphoprotein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100240988 835816 100819339 100793322 103851786 7490485 7474718 11446015 107931599 107904306 106377539 102611567 101250131 102596645 107826104 107774819 4352781 100382414 123110319 123119353 123102172 123400120 110429688 100842499 5725730
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