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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100242834   RING-H2 finger protein ATL79 
 vvi-u.5   100242834   RING-H2 finger protein ATL79 
 ath-u.5   AT5G47610   RING/U-box superfamily protein 
 bra-r.6   103853825   RING-H2 finger protein ATL79 
 bra-r.6   103827633   RING-H2 finger protein ATL79 
 ppo-u.5   7489062   RING-H2 finger protein ATL79 
 ppo-u.5   7480353   RING-H2 finger protein ATL79 
 ghi-r.1   107930159   RING-H2 finger protein ATL79 
 ghi-r.1   107922978   RING-H2 finger protein ATL79 
 ghi-r.1   107912038   RING-H2 finger protein ATL79 
 bna-r.1   106436904   RING-H2 finger protein ATL79-like 
 bna-r.1   106409018   RING-H2 finger protein ATL79-like 
 bna-r.1   106399489   RING-H2 finger protein ATL79-like 

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Top 50 coexpressed genes to 100242834 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242834 (vvi-r.5 coexpression data)

CoexMap"100242834"


vviLOC100242834 | Entrez gene ID : 100242834      
Species vvi ath bra ppo ghi bna sbi osa gma sot sly cit mtr tae hvu zma cre nta bdi
Paralog 2 1 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (3494 genes)  IEA  
Protein XP_002277530.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  mito 2,  E.R._plas 2,  plas 1,  extr 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_002277530.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002277530.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100242834
vvi-u.5
for
100242834
ath-u.5
for
AT5G47610
bra-r.6
for
103853825
bra-r.6
for
103827633
ppo-u.5
for
7489062
ppo-u.5
for
7480353
ghi-r.1
for
107930159
ghi-r.1
for
107922978
ghi-r.1
for
107912038
bna-r.1
for
106436904
bna-r.1
for
106409018
bna-r.1
for
106399489


Ortholog ID: 12449
Species vvi ath bra bra ppo ppo ghi ghi ghi bna bna bna
Symbol LOC100242834 AT5G47610 LOC103853825 LOC103827633 LOC7489062 LOC7480353 LOC107930159 LOC107922978 LOC107904535 LOC106436904 LOC106409018 LOC106399489
Function* RING-H2 finger protein ATL79 RING/U-box superfamily protein RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79 RING-H2 finger protein ATL79-like RING-H2 finger protein ATL79-like RING-H2 finger protein ATL79-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00073 Cutin, suberine and wax biosynthesis 5
bna04075 Plant hormone signal transduction 4
bna04712 Circadian rhythm - plant 4
bna00062 Fatty acid elongation 2
bna04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242834 834811 103853825 103827633 7489062 7480353 107930159 107922978 107904535 106436904 106409018 106399489
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