ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-r.5	100248252	uncharacterized LOC100248252
vvi-u.5	100248252	uncharacterized LOC100248252
vvi-m.5	100248252	uncharacterized LOC100248252
ath-u.5	AT3G06840	uncharacterized protein
ath-u.5	AT5G49170	uncharacterized protein
gma-u.5	100786266	uncharacterized LOC100786266
gma-u.5	100777661	uncharacterized LOC100777661
bra-r.6	103854577	uncharacterized LOC103854577
bra-r.6	103875020	uncharacterized LOC103875020
bra-r.6	103849648	uncharacterized LOC103849648
ppo-u.5	18101824	uncharacterized LOC18101824
mtr-u.5	25488071	uncharacterized LOC25488071
ghi-r.1	107935119	uncharacterized LOC107935119
ghi-r.1	107933197	uncharacterized LOC107933197
ghi-r.1	107908527	uncharacterized LOC107908527
bna-r.1	106407113	uncharacterized LOC106407113
cit-r.1	102630701	uncharacterized LOC102630701
sly-u.5	101259876	uncharacterized LOC101259876
sot-r.1	102591081	uncharacterized LOC102591081
nta-r.1	107802380	uncharacterized LOC107802380
nta-r.1	107800565	uncharacterized LOC107800565
tae-r.2	123181762	uncharacterized LOC123181762

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002271732.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_002271732.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002271732.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-r.5 for 100248252	vvi-u.5 for 100248252	vvi-m.5 for 100248252	ath-u.5 for AT3G06840	ath-u.5 for AT5G49170	gma-u.5 for 100786266	gma-u.5 for 100777661	bra-r.6 for 103854577	bra-r.6 for 103875020	bra-r.6 for 103849648	ppo-u.5 for 18101824	mtr-u.5 for 25488071	ghi-r.1 for 107935119	ghi-r.1 for 107933197	ghi-r.1 for 107908527	bna-r.1 for 106407113	cit-r.1 for 102630701	sly-u.5 for 101259876	sot-r.1 for 102591081	nta-r.1 for 107802380	nta-r.1 for 107800565	tae-r.2 for 123181762

Ortholog

Ortholog ID: 6254

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

tae

Symbol

Function^*

uncharacterized LOC100248252

uncharacterized protein

uncharacterized LOC100786266

uncharacterized LOC100777661

uncharacterized LOC103854577

uncharacterized LOC103875020

uncharacterized LOC103849648

uncharacterized LOC18101824

uncharacterized LOC25488071

uncharacterized LOC107935119

uncharacterized LOC107933197

uncharacterized LOC107908527

uncharacterized LOC106346111

uncharacterized LOC106351114

uncharacterized LOC102630701

uncharacterized LOC101259876

uncharacterized LOC102591081

uncharacterized LOC107802380

uncharacterized LOC107800565

uncharacterized LOC123181762

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2
bra00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra00670	One carbon pool by folate	3
bra00785	Lipoic acid metabolism	3
bra01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	3
sly03420	Nucleotide excision repair	2
sly03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2

Expression

Expression pattern

Entrez Gene ID^*

100248252

819868

834976

100786266

100777661

103854577

103875020

103849648

18101824

25488071

107935119

107933197

107908527

106346111

106351114

102630701

101259876

102591081

107802380

107800565

123181762

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100248252 (vvi-r.5 coexpression data)

Top 50 enrichment test to 100248252 (vvi-r.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	tae	sbi	osa	hvu	zma	cre	bdi
Paralog	3	2	2	3	1	1	3	1	1	1	1	2	1	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100248252 (vvi-r.5 coexpression data)

Top 50 enrichment test to 100248252 (vvi-r.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**