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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5  100250665  pentatricopeptide repeat-containing protein At2g04860 
 vvi-u.5  100250665  pentatricopeptide repeat-containing protein At2g04860 
 ath-u.5  AT2G04860  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100787089  pentatricopeptide repeat-containing protein At2g04860 
 bra-r.6  103860319  pentatricopeptide repeat-containing protein At2g04860 
 ppo-u.5  18104895  pentatricopeptide repeat-containing protein At2g04860 
 mtr-u.5  11431817  pentatricopeptide repeat-containing protein At2g04860 
 ghi-r.1  107922427  pentatricopeptide repeat-containing protein At2g04860 

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Top 50 coexpressed genes to 100250665 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250665 (vvi-r.5 coexpression data)

CoexMap"100250665"


vviLOC100250665 | Entrez gene ID : 100250665
Species vvi ath gma bra ppo mtr ghi sbi osa sot sly cit tae bna hvu zma cre nta bdi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010664572.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  mito 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_010664572.1)
Subcellular
localization
TargetP
other 5  (predict for XP_010664572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-r.5
for
100250665


vvi-u.5
for
100250665


ath-u.5
for
AT2G04860


gma-u.5
for
100787089


bra-r.6
for
103860319


ppo-u.5
for
18104895


mtr-u.5
for
11431817


ghi-r.1
for
107922427



Ortholog ID: 15806
Species vvi ath gma bra ppo mtr ghi
Symbol LOC100250665 AT2G04860 LOC100787089 LOC103860319 LOC18104895 LOC11431817 LOC107922427
Function* pentatricopeptide repeat-containing protein At2g04860 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860 pentatricopeptide repeat-containing protein At2g04860
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250665 815032 100787089 103860319 18104895 11431817 107922427
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