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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5  100252032  pentatricopeptide repeat-containing protein At2g17210 
 vvi-u.5  100252032  pentatricopeptide repeat-containing protein At2g17210 
 bra-r.6  103845985  pentatricopeptide repeat-containing protein At2g17210 
 ghi-r.1  107929584  pentatricopeptide repeat-containing protein At2g17210 
 cit-r.1  102607478  pentatricopeptide repeat-containing protein At2g17210 
 sly-u.5  101257815  pentatricopeptide repeat-containing protein At2g17210 
 sot-r.1  107058332  pentatricopeptide repeat-containing protein At2g17210 
 nta-r.1  107776422  pentatricopeptide repeat-containing protein At2g17210-like 
 nta-r.1  107812712  pentatricopeptide repeat-containing protein At2g17210-like 
 tae-r.2  123143719  pentatricopeptide repeat-containing protein At2g17210 
 hvu-r.1  123401716  pentatricopeptide repeat-containing protein At2g17210-like 

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Top 50 coexpressed genes to 100252032 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252032 (vvi-r.5 coexpression data)

CoexMap"100252032"


vviLOC100252032 | Entrez gene ID : 100252032
Species vvi bra ghi cit sly sot nta tae hvu sbi osa gma mtr ath bna ppo zma cre bdi
Paralog 2 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002279627.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_002279627.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002279627.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-r.5
for
100252032


vvi-u.5
for
100252032


bra-r.6
for
103845985


ghi-r.1
for
107929584


cit-r.1
for
102607478


sly-u.5
for
101257815


sot-r.1
for
107058332


nta-r.1
for
107776422


nta-r.1
for
107812712


tae-r.2
for
123143719


hvu-r.1
for
123401716



Ortholog ID: 12638
Species vvi bra ghi cit sly sot nta nta tae hvu
Symbol LOC100252032 LOC103845985 LOC107929584 LOC102607478 LOC101257815 LOC107058332 LOC107776422 LOC107812712 LOC123143719 LOC123401716
Function* pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210-like pentatricopeptide repeat-containing protein At2g17210-like pentatricopeptide repeat-containing protein At2g17210 pentatricopeptide repeat-containing protein At2g17210-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252032 103845985 107929584 102607478 101257815 107058332 107776422 107812712 123143719 123401716
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