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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5  100254394  pentatricopeptide repeat-containing protein ELI1, chloroplastic 
 vvi-u.5  100254394  pentatricopeptide repeat-containing protein ELI1, chloroplastic 
 gma-u.5  100780299  pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5  25479571  pentatricopeptide repeat-containing protein At5g06540 
 cit-r.1  107177506  pentatricopeptide repeat-containing protein At5g66520-like 
 sly-u.5  101263467  pentatricopeptide repeat-containing protein At5g66520-like 
 sot-r.1  107061905  pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1  107764279  pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1  107828921  pentatricopeptide repeat-containing protein At5g66520-like 

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Top 50 coexpressed genes to 100254394 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254394 (vvi-r.5 coexpression data)

CoexMap"100254394"


vviLOC100254394 | Entrez gene ID : 100254394
Species vvi gma mtr cit sly sot nta sbi osa bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002282063.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 1,  E.R. 1,  cysk_nucl 1,  cyto 1,  plas 1,  vacu 1,  cyto_plas 1  (predict for XP_002282063.2)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for XP_002282063.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-r.5
for
100254394


vvi-u.5
for
100254394


gma-u.5
for
100780299


mtr-u.5
for
25479571


cit-r.1
for
107177506


sly-u.5
for
101263467


sot-r.1
for
107061905


nta-r.1
for
107764279


nta-r.1
for
107828921



Ortholog ID: 16461
Species vvi gma mtr cit sly sot nta nta
Symbol LOC100254394 LOC100780299 LOC25479571 LOC107177506 LOC101263467 LOC107061905 LOC107764279 LOC107828921
Function* pentatricopeptide repeat-containing protein ELI1, chloroplastic pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254394 100780299 25479571 107177506 101263467 107061905 107764279 107828921
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