ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-r.5	100256011	uncharacterized LOC100256011
vvi-u.5	100256011	uncharacterized LOC100256011
ath-u.5	AT2G10950	BSD domain-containing protein
gma-u.5	102663027	uncharacterized LOC102663027
gma-u.5	100802079	uncharacterized LOC100802079
ppo-u.5	7474673	uncharacterized LOC7474673
ppo-u.5	7459870	uncharacterized LOC7459870
mtr-u.5	11438798	uncharacterized LOC11438798
ghi-r.1	107901327	uncharacterized LOC107901327
ghi-r.1	107962585	uncharacterized LOC107962585
cit-r.1	102619487	uncharacterized LOC102619487
sly-u.5	101265654	COP1-interactive protein 1
sot-r.1	102589266	uncharacterized LOC102589266
nta-r.1	107782840	uncharacterized LOC107782840
nta-r.1	107815223	uncharacterized LOC107815223

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002282479.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, chlo 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_002282479.1)

Subcellular
localization
TargetP

chlo 7, other 4

(predict for XP_002282479.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-r.5 for 100256011	vvi-u.5 for 100256011	ath-u.5 for AT2G10950	gma-u.5 for 102663027	gma-u.5 for 100802079	ppo-u.5 for 7474673	ppo-u.5 for 7459870	mtr-u.5 for 11438798	ghi-r.1 for 107901327	ghi-r.1 for 107962585	cit-r.1 for 102619487	sly-u.5 for 101265654	sot-r.1 for 102589266	nta-r.1 for 107782840	nta-r.1 for 107815223

Ortholog

Ortholog ID: 13416

Species

vvi

ath

gma

ppo

mtr

ghi

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC100256011

BSD domain-containing protein

uncharacterized LOC102663027

uncharacterized LOC100802079

uncharacterized LOC7474673

uncharacterized LOC7459870

uncharacterized LOC11438798

uncharacterized LOC107901327

uncharacterized LOC107962585

uncharacterized LOC102619487

COP1-interactive protein 1

uncharacterized LOC102589266

uncharacterized LOC107782840

uncharacterized LOC107815223

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2
gma00330	Arginine and proline metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	3
sly04141	Protein processing in endoplasmic reticulum	2
sly00562	Inositol phosphate metabolism	2
sly04070	Phosphatidylinositol signaling system	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100256011

815559

102663027

100802079

7474673

7459870

11438798

107901327

107962585

102619487

101265654

102589266

107782840

107815223

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100256011 (vvi-r.5 coexpression data)

Top 50 enrichment test to 100256011 (vvi-r.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	ghi	cit	sly	sot	nta	sbi	osa	bra	tae	bna	hvu	zma	cre	bdi
Paralog	2	1	2	2	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100256011 (vvi-r.5 coexpression data)

Top 50 enrichment test to 100256011 (vvi-r.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**