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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5  100258227  growth-regulating factor 8 
 vvi-u.5  100258227  growth-regulating factor 8 
 vvi-m.5  100258227  growth-regulating factor 8 
 ath-u.5  GRF8  growth-regulating factor 8 
 bra-r.6  103861465  growth-regulating factor 8-like 
 bra-r.6  103864387  growth-regulating factor 8 
 ppo-u.5  7477815  growth-regulating factor 8 
 ghi-r.1  107947211  growth-regulating factor 8 
 ghi-r.1  107943523  growth-regulating factor 8 
 bna-r.1  106440817  growth-regulating factor 8 
 bna-r.1  106376014  growth-regulating factor 8 
 bna-r.1  106348946  growth-regulating factor 8-like 
 cit-r.1  102630143  growth-regulating factor 7-like 
 sly-u.5  101249846  growth-regulating factor 8-like 
 sot-r.1  102587130  growth-regulating factor 8-like 
 nta-r.1  107769640  growth-regulating factor 8-like 
 nta-r.1  107823287  growth-regulating factor 8 

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Top 50 coexpressed genes to 100258227 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258227 (vvi-r.5 coexpression data)

CoexMap"100258227"


vviLOC100258227 | Entrez gene ID : 100258227
Species vvi ath bra ppo ghi bna cit sly sot nta sbi osa gma mtr tae hvu zma cre bdi
Paralog 3 1 2 1 2 3 1 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (199 genes)  IEA  
GO:0032502 [list] [network] developmental process  (306 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002272535.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002272535.3)
Subcellular
localization
TargetP
other 8  (predict for XP_002272535.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-r.5
for
100258227


vvi-u.5
for
100258227


vvi-m.5
for
100258227


ath-u.5
for
GRF8


bra-r.6
for
103861465


bra-r.6
for
103864387


ppo-u.5
for
7477815


ghi-r.1
for
107947211


ghi-r.1
for
107943523


bna-r.1
for
106440817


bna-r.1
for
106376014


bna-r.1
for
106348946


cit-r.1
for
102630143


sly-u.5
for
101249846


sot-r.1
for
102587130


nta-r.1
for
107769640


nta-r.1
for
107823287



Ortholog ID: 13180
Species vvi ath bra bra ppo ghi ghi bna bna bna cit sly sot nta nta
Symbol LOC100258227 GRF8 LOC103861465 LOC103864387 LOC7477815 LOC107947211 LOC107943523 LOC106440817 LOC106376014 LOC111214151 LOC102630143 LOC101249846 LOC102587130 LOC107769640 LOC107823287
Function* growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8-like growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8 growth-regulating factor 8-like growth-regulating factor 7-like growth-regulating factor 8-like growth-regulating factor 8-like growth-regulating factor 8-like growth-regulating factor 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258227 828515 103861465 103864387 7477815 107947211 107943523 106440817 106376014 111214151 102630143 101249846 102587130 107769640 107823287
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