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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100258725   gibberellin 2-beta-dioxygenase 6 
 vvi-u.5   100258725   gibberellin 2-beta-dioxygenase 6 
 vvi-m.5   100258725   gibberellin 2-beta-dioxygenase 6 
 ath-u.5   AT5G58660   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100819244   gibberellin 2-beta-dioxygenase 8 
 gma-u.5   100794065   gibberellin 2-beta-dioxygenase 8-like 
 ppo-u.5   7496781   gibberellin 2-beta-dioxygenase 8 
 mtr-u.5   25490919   gibberellin 2-beta-dioxygenase 8 
 ghi-r.1   107959204   gibberellin 2-beta-dioxygenase 6 
 ghi-r.1   107906631   gibberellin 2-beta-dioxygenase 6 
 bna-r.1   106388105   gibberellin 2-beta-dioxygenase 6-like 
 bna-r.1   106387458   gibberellin 2-beta-dioxygenase 8 
 cit-r.1   102627989   gibberellin 2-beta-dioxygenase 8 
 sly-u.5   101256685   gibberellin 2-beta-dioxygenase 8 
 sot-r.1   102591012   gibberellin 2-beta-dioxygenase 8 
 nta-r.1   107781790   gibberellin 2-beta-dioxygenase 8 
 osa-u.5   4335758   gibberellin 2-beta-dioxygenase 8 
 hvu-r.1   123441259   gibberellin 2-beta-dioxygenase 5-like 
 sbi-r.1   8081983   gibberellin 2-beta-dioxygenase 8 
 bdi-r.1   100841285   gibberellin 2-beta-dioxygenase 8 

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Top 50 coexpressed genes to 100258725 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258725 (vvi-r.5 coexpression data)

CoexMap"100258725"


vviLOC100258725 | Entrez gene ID : 100258725      
Species vvi ath gma ppo mtr ghi bna cit sly sot nta osa hvu sbi bdi cre tae bra zma
Paralog 3 1 2 1 1 2 2 1 1 1 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00904 [list] [network] Diterpenoid biosynthesis (25 genes)
GO BP
GO CC
GO MF
GO:0051213 [list] [network] dioxygenase activity  (106 genes)  IEA  
Protein XP_002277356.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 3,  cyto_nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_002277356.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002277356.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100258725
vvi-u.5
for
100258725
vvi-m.5
for
100258725
ath-u.5
for
AT5G58660
gma-u.5
for
100819244
gma-u.5
for
100794065
ppo-u.5
for
7496781
mtr-u.5
for
25490919
ghi-r.1
for
107959204
ghi-r.1
for
107906631
bna-r.1
for
106388105
bna-r.1
for
106387458
cit-r.1
for
102627989
sly-u.5
for
101256685
sot-r.1
for
102591012
nta-r.1
for
107781790
osa-u.5
for
4335758
hvu-r.1
for
123441259
sbi-r.1
for
8081983
bdi-r.1
for
100841285


Ortholog ID: 7240
Species vvi ath gma gma ppo mtr ghi ghi ghi bna bna cit sly sot nta osa hvu sbi bdi
Symbol LOC100258725 AT5G58660 LOC100819244 LOC100794065 LOC7496781 LOC25490919 LOC107959204 LOC107906631 LOC107891609 LOC106388105 LOC106387458 LOC102627989 LOC101256685 LOC102591012 LOC107781790 LOC4335758 LOC123441259 LOC8081983 LOC100841285
Function* gibberellin 2-beta-dioxygenase 6 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8-like gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 5-like gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 7
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 3
bna00904 Diterpenoid biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 4
bdi04517 IgSF CAM signaling 4
bdi04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258725 835980 100819244 100794065 7496781 25490919 107959204 107906631 107891609 106388105 106387458 102627989 101256685 102591012 107781790 4335758 123441259 8081983 100841285
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