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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100260403   elongator complex protein 6 
 vvi-u.5   100260403   elongator complex protein 6 
 ath-u.5   ELP6   elongator protein 6 
 gma-u.5   100797712   UPF0405 protein C3orf75 homolog 
 bra-r.6   103838895   elongator complex protein 6 
 ppo-u.5   7457897   elongator complex protein 6 
 mtr-u.5   25499938   elongator complex protein 6 
 ghi-r.1   107940873   elongator complex protein 6 
 ghi-r.1   107891166   elongator complex protein 6 
 bna-r.1   106360945   elongator complex protein 6 
 bna-r.1   106439146   elongator complex protein 6 
 cit-r.1   102630370   elongator complex protein 6 
 sly-u.5   101258626   elongator complex protein 6 
 sot-r.1   102599352   elongator complex protein 6 
 nta-r.1   107799853   elongator complex protein 6 
 nta-r.1   107759753   elongator complex protein 6 
 osa-u.5   4332463   elongator complex protein 6 
 zma-u.5   100280349   uncharacterized LOC100280349 
 tae-r.2   123097827   elongator complex protein 6 
 tae-r.2   123092511   elongator complex protein 6 
 tae-r.2   123085526   elongator complex protein 6 
 hvu-r.1   123448957   elongator complex protein 6 
 sbi-r.1   8084890   elongator complex protein 6 
 bdi-r.1   100840659   elongator complex protein 6 

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Top 50 coexpressed genes to 100260403 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260403 (vvi-r.5 coexpression data)

CoexMap"100260403"


vviLOC100260403 | Entrez gene ID : 100260403      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002098 [list] [network] tRNA wobble uridine modification  (16 genes)  IEA  
GO CC
GO:0033588 [list] [network] elongator holoenzyme complex  (6 genes)  IEA  
GO MF
Protein XP_002281393.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for XP_002281393.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002281393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100260403
vvi-u.5
for
100260403
ath-u.5
for
ELP6
gma-u.5
for
100797712
bra-r.6
for
103838895
ppo-u.5
for
7457897
mtr-u.5
for
25499938
ghi-r.1
for
107940873
ghi-r.1
for
107891166
bna-r.1
for
106360945
bna-r.1
for
106439146
cit-r.1
for
102630370
sly-u.5
for
101258626
sot-r.1
for
102599352
nta-r.1
for
107799853
nta-r.1
for
107759753
osa-u.5
for
4332463
zma-u.5
for
100280349
tae-r.2
for
123097827
tae-r.2
for
123092511
tae-r.2
for
123085526
hvu-r.1
for
123448957
sbi-r.1
for
8084890
bdi-r.1
for
100840659


Ortholog ID: 10849
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100260403 ELP6 LOC100797712 LOC103838895 LOC7457897 LOC25499938 LOC107940873 LOC107891166 LOC106360945 LOC106439146 LOC102630370 LOC101258626 LOC102599352 LOC107799853 LOC107759753 LOC4332463 LOC100280349 LOC123097827 LOC123092511 LOC123085526 LOC123448957 LOC8084890 LOC100840659
Function* elongator complex protein 6 elongator protein 6 UPF0405 protein C3orf75 homolog elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 uncharacterized LOC100280349 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6 elongator complex protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 3
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 3
nta00230 Purine metabolism 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260403 826600 100797712 103838895 7457897 25499938 107940873 107891166 106360945 106439146 102630370 101258626 102599352 107799853 107759753 4332463 100280349 123097827 123092511 123085526 123448957 8084890 100840659
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