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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-r.5   100265596   pentatricopeptide repeat-containing protein At2g27610 
 vvi-u.5   100265596   pentatricopeptide repeat-containing protein At2g27610 
 gma-u.5   102664984   pentatricopeptide repeat-containing protein At3g16610 
 bra-r.6   103860606   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 mtr-u.5   25493423   pentatricopeptide repeat-containing protein At5g27110 
 bna-r.1   106400743   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 bna-r.1   106410061   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 cit-r.1   102630603   putative pentatricopeptide repeat-containing protein At1g56570 
 nta-r.1   107771046   pentatricopeptide repeat-containing protein At2g27610-like 
 nta-r.1   107784194   pentatricopeptide repeat-containing protein At2g27610-like 

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Top 50 coexpressed genes to 100265596 (vvi-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100265596 (vvi-r.5 coexpression data)

CoexMap"100265596"


vviLOC100265596 | Entrez gene ID : 100265596      
Species vvi gma bra mtr bna cit nta sbi osa sot sly tae ath hvu ppo ghi zma cre bdi
Paralog 2 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_019080132.1 [sequence] [blastp]
XP_059598035.1 [sequence] [blastp]
XP_059598036.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 3,  chlo 1,  nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_019080132.1)
chlo 6,  vacu 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_059598035.1)
chlo 6,  vacu 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_059598036.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_019080132.1)
chlo 7,  scret 3  (predict for XP_059598035.1)
chlo 7,  scret 3  (predict for XP_059598036.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-r.5
for
100265596
vvi-u.5
for
100265596
gma-u.5
for
102664984
bra-r.6
for
103860606
mtr-u.5
for
25493423
bna-r.1
for
106400743
bna-r.1
for
106410061
cit-r.1
for
102630603
nta-r.1
for
107771046
nta-r.1
for
107784194


Ortholog ID: 16395
Species vvi gma bra mtr bna bna cit nta nta
Symbol LOC100265596 LOC102664984 LOC103860606 LOC25493423 LOC106400743 LOC106410061 LOC102630603 LOC107771046 LOC107784194
Function* pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like putative pentatricopeptide repeat-containing protein At1g56570 pentatricopeptide repeat-containing protein At2g27610-like pentatricopeptide repeat-containing protein At2g27610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265596 102664984 103860606 25493423 106400743 106410061 102630603 107771046 107784194
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