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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100240814   E3 ubiquitin-protein ligase RHF1A 
 vvi-r.5   100240814   E3 ubiquitin-protein ligase RHF1A 
 ath-u.5   RHF1A   RING-H2 group F1A 
 gma-u.5   100805449   E3 ubiquitin-protein ligase RHF1A 
 gma-u.5   100790134   E3 ubiquitin-protein ligase RHF1A 
 gma-u.5   100775754   E3 ubiquitin-protein ligase RHF1A 
 bra-r.6   103835195   E3 ubiquitin-protein ligase RHF1A 
 ppo-u.5   7471500   E3 ubiquitin-protein ligase RHF1A 
 ppo-u.5   7459040   E3 ubiquitin-protein ligase RHF1A 
 mtr-u.5   25486117   E3 ubiquitin-protein ligase RHF1A 
 ghi-r.1   107941837   E3 ubiquitin-protein ligase RHF1A 
 bna-r.1   106361560   E3 ubiquitin-protein ligase RHF1A 
 bna-r.1   106439725   E3 ubiquitin-protein ligase RHF1A 
 cit-r.1   102611424   E3 ubiquitin-protein ligase RHF1A-like 
 sly-u.5   101251028   E3 ubiquitin-protein ligase RHF1A 
 sot-r.1   102583410   E3 ubiquitin-protein ligase RHF1A-like 
 nta-r.1   107786361   E3 ubiquitin-protein ligase RHF1A-like 
 nta-r.1   107802070   E3 ubiquitin-protein ligase RHF1A 

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Top 50 coexpressed genes to 100240814 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100240814 (vvi-u.5 coexpression data)

CoexMap"100240814"


vviLOC100240814 | Entrez gene ID : 100240814      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta sbi osa tae hvu zma cre bdi
Paralog 2 1 3 1 2 1 1 2 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (280 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
Protein XP_002281045.1 [sequence] [blastp]
XP_019075788.1 [sequence] [blastp]
XP_059592821.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_002281045.1)
chlo 5,  chlo_mito 3,  vacu 1,  cyto 1,  plas 1,  extr 1,  golg 1,  golg_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_019075788.1)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for XP_059592821.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_002281045.1)
mito 2  (predict for XP_019075788.1)
scret 8,  other 6  (predict for XP_059592821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100240814
vvi-r.5
for
100240814
ath-u.5
for
RHF1A
gma-u.5
for
100805449
gma-u.5
for
100790134
gma-u.5
for
100775754
bra-r.6
for
103835195
ppo-u.5
for
7471500
ppo-u.5
for
7459040
mtr-u.5
for
25486117
ghi-r.1
for
107941837
bna-r.1
for
106361560
bna-r.1
for
106439725
cit-r.1
for
102611424
sly-u.5
for
101251028
sot-r.1
for
102583410
nta-r.1
for
107786361
nta-r.1
for
107802070


Ortholog ID: 12665
Species vvi ath gma gma gma bra ppo ppo mtr ghi bna bna cit sly sot nta nta
Symbol LOC100240814 RHF1A LOC100805449 LOC100775754 LOC100785684 LOC103835195 LOC7471500 LOC7459040 LOC25486117 LOC107941837 LOC106361560 LOC106439725 LOC102611424 LOC101251028 LOC102583410 LOC107786361 LOC107802070
Function* E3 ubiquitin-protein ligase RHF1A RING-H2 group F1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A-like E3 ubiquitin-protein ligase RHF1A E3 ubiquitin-protein ligase RHF1A-like E3 ubiquitin-protein ligase RHF1A-like E3 ubiquitin-protein ligase RHF1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 6
gma00513 Various types of N-glycan biosynthesis 6
gma04141 Protein processing in endoplasmic reticulum 6
gma00500 Starch and sucrose metabolism 3
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04144 Endocytosis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 7
mtr00670 One carbon pool by folate 6
mtr01230 Biosynthesis of amino acids 5
mtr01240 Biosynthesis of cofactors 3
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 7
ghi04120 Ubiquitin mediated proteolysis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100240814 827062 100805449 100775754 100785684 103835195 7471500 7459040 25486117 107941837 106361560 106439725 102611424 101251028 102583410 107786361 107802070
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