ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100242143	uncharacterized LOC100242143
vvi-r.5	100242143	uncharacterized LOC100242143
ath-u.5	AT4G12340	copper ion binding protein
gma-u.5	100819690	uncharacterized LOC100819690
bra-r.6	103868135	uncharacterized LOC103868135
bra-r.6	103839897	uncharacterized LOC103839897
bra-r.6	117130666	uncharacterized LOC117130666
ppo-u.5	18094394	uncharacterized LOC18094394
ppo-u.5	7465533	uncharacterized LOC7465533
mtr-u.5	25493628	uncharacterized LOC25493628
ghi-r.1	107963635	uncharacterized LOC107963635
ghi-r.1	107946948	uncharacterized LOC107946948
ghi-r.1	107918395	uncharacterized LOC107918395
bna-r.1	BNAA09G21010D	uncharacterized BNAA09G21010D
bna-r.1	106436649	uncharacterized LOC106436649
bna-r.1	BNAC09G23270D	uncharacterized BNAC09G23270D
cit-r.1	102627073	hypothetical protein
sly-u.5	101267377	uncharacterized LOC101267377
sot-r.1	102589428	uncharacterized LOC102589428
nta-r.1	107761450	uncharacterized LOC107761450
nta-r.1	107793837	uncharacterized LOC107793837
osa-u.5	4337542	uncharacterized LOC4337542
zma-u.5	100282246	copper ion binding
tae-r.2	123083620	translation initiation factor IF-2
tae-r.2	123103112	uncharacterized LOC123103112
tae-r.2	123110376	uncharacterized LOC123110376
hvu-r.1	123410366	uncharacterized LOC123410366
sbi-r.1	8065280	leiomodin-2
bdi-r.1	100839819	uncharacterized LOC100839819
cre-r.1	CHLRE_03g213425v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_059599408.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 3, nucl 1, mito 1, cysk 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_059599408.1)

Subcellular
localization
TargetP

other 7

(predict for XP_059599408.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100242143	vvi-r.5 for 100242143	ath-u.5 for AT4G12340	gma-u.5 for 100819690	bra-r.6 for 103868135	bra-r.6 for 103839897	bra-r.6 for 117130666	ppo-u.5 for 18094394	ppo-u.5 for 7465533	mtr-u.5 for 25493628	ghi-r.1 for 107963635	ghi-r.1 for 107946948	ghi-r.1 for 107918395	bna-r.1 for BNAA09G21010D	bna-r.1 for 106436649	bna-r.1 for BNAC09G23270D	cit-r.1 for 102627073	sly-u.5 for 101267377	sot-r.1 for 102589428	nta-r.1 for 107761450	nta-r.1 for 107793837	osa-u.5 for 4337542	zma-u.5 for 100282246	tae-r.2 for 123083620	tae-r.2 for 123103112	tae-r.2 for 123110376	hvu-r.1 for 123410366	sbi-r.1 for 8065280	bdi-r.1 for 100839819	cre-r.1 for CHLRE_03g213425v5

Ortholog

Ortholog ID: 4590

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100242143

copper ion binding protein

uncharacterized LOC100819690

uncharacterized LOC103868135

uncharacterized LOC103839897

uncharacterized LOC117130666

uncharacterized LOC18094394

uncharacterized LOC7465533

uncharacterized LOC25493628

uncharacterized LOC107946948

uncharacterized LOC107918395

uncharacterized LOC107943445

uncharacterized LOC106436649

uncharacterized BNAC09G23270D

uncharacterized LOC106397221

hypothetical protein

uncharacterized LOC101267377

uncharacterized LOC102589428

uncharacterized LOC107761450

uncharacterized LOC107793837

uncharacterized LOC4337542

copper ion binding

leiomodin-2

uncharacterized LOC123184685

uncharacterized LOC123410366

leiomodin-2

uncharacterized LOC100839819

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	6
vvi03018	RNA degradation	2
vvi03010	Ribosome	2
vvi00230	Purine metabolism	2
vvi00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	7
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	10
bra03008	Ribosome biogenesis in eukaryotes	3
bra03440	Homologous recombination	2
bra03013	Nucleocytoplasmic transport	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	4
bra03050	Proteasome	3
bra03008	Ribosome biogenesis in eukaryotes	3
bra03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	7
ppo04141	Protein processing in endoplasmic reticulum	6
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03013	Nucleocytoplasmic transport	3
bna03015	mRNA surveillance pathway	3
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00020	Citrate cycle (TCA cycle)	5
cit01200	Carbon metabolism	5
cit01210	2-Oxocarboxylic acid metabolism	3
cit01230	Biosynthesis of amino acids	3
cit00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	10
nta04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	8
nta04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae03013	Nucleocytoplasmic transport	3
tae04141	Protein processing in endoplasmic reticulum	3
tae00520	Amino sugar and nucleotide sugar metabolism	2
tae01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	11
hvu00020	Citrate cycle (TCA cycle)	7
hvu00010	Glycolysis / Gluconeogenesis	7
hvu00620	Pyruvate metabolism	6
hvu01210	2-Oxocarboxylic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	6
sbi00020	Citrate cycle (TCA cycle)	3
sbi00620	Pyruvate metabolism	3
sbi01200	Carbon metabolism	3
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3

Expression

Expression pattern

Entrez Gene ID^*

100242143

826843

100819690

103868135

103839897

117130666

18094394

7465533

25493628

107946948

107918395

107943445

106436649

106418262

106397221

102627073

101267377

102589428

107761450

107793837

4337542

100282246

123119399

123179802

123184685

123410366

8065280

100839819

5725017

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100242143 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100242143 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	3	2	1	3	3	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100242143 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100242143 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**