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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242428   pentatricopeptide repeat-containing protein At3g49740 
 vvi-r.5   100242428   pentatricopeptide repeat-containing protein At3g49740 
 gma-u.5   100818021   pentatricopeptide repeat-containing protein At3g49740 
 bra-r.6   103860631   pentatricopeptide repeat-containing protein At3g49740 
 ghi-r.1   107933901   pentatricopeptide repeat-containing protein At3g49740 
 bna-r.1   106407458   pentatricopeptide repeat-containing protein At3g49740-like 
 bna-r.1   106439990   pentatricopeptide repeat-containing protein At3g49740-like 
 cit-r.1   102617023   pentatricopeptide repeat-containing protein At3g49740 
 sly-u.5   101252589   pentatricopeptide repeat-containing protein At3g49740 
 sot-r.1   102596375   pentatricopeptide repeat-containing protein At3g49740 
 nta-r.1   107786147   pentatricopeptide repeat-containing protein At3g49740 
 nta-r.1   107823559   pentatricopeptide repeat-containing protein At3g49740 

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Top 50 coexpressed genes to 100242428 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242428 (vvi-u.5 coexpression data)

CoexMap"100242428"


vviLOC100242428 | Entrez gene ID : 100242428    
Species vvi gma bra ghi bna cit sly sot nta sbi osa mtr tae ath hvu ppo zma cre bdi
Paralog 2 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002263704.2 [sequence] [blastp]
XP_010647149.1 [sequence] [blastp]
XP_010647150.1 [sequence] [blastp]
XP_019074098.1 [sequence] [blastp]
XP_059594607.1 [sequence] [blastp]
XP_059594608.1 [sequence] [blastp]
XP_059594609.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_002263704.2)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_010647149.1)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_010647150.1)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_019074098.1)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_059594607.1)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_059594608.1)
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  chlo_mito 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1  (predict for XP_059594609.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002263704.2)
other 7  (predict for XP_010647149.1)
other 7  (predict for XP_010647150.1)
other 7  (predict for XP_019074098.1)
other 7  (predict for XP_059594607.1)
other 7  (predict for XP_059594608.1)
other 7  (predict for XP_059594609.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242428
vvi-r.5
for
100242428
gma-u.5
for
100818021
bra-r.6
for
103860631
ghi-r.1
for
107933901
bna-r.1
for
106407458
bna-r.1
for
106439990
cit-r.1
for
102617023
sly-u.5
for
101252589
sot-r.1
for
102596375
nta-r.1
for
107786147
nta-r.1
for
107823559


Ortholog ID: 14029
Species vvi gma bra ghi bna bna cit sly sot nta nta
Symbol LOC100242428 LOC100818021 LOC103860631 LOC107933901 LOC106407458 LOC106439990 LOC102617023 LOC101252589 LOC102596375 LOC107786147 LOC107823559
Function* pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740-like pentatricopeptide repeat-containing protein At3g49740-like pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242428 100818021 103860631 107933901 106407458 106439990 102617023 101252589 102596375 107786147 107823559
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