Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100242647  pentatricopeptide repeat-containing protein At2g22070 
 vvi-r.5  100242647  pentatricopeptide repeat-containing protein At2g22070 
 gma-u.5  100808394  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1  107918830  pentatricopeptide repeat-containing protein At2g22070 
 zma-u.5  103650055  pentatricopeptide repeat-containing protein At2g13600 
 bdi-r.1  104582554  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

close


Top 50 coexpressed genes to 100242647 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100242647 (vvi-u.5 coexpression data)

CoexMap"100242647"


vviLOC100242647 | Entrez gene ID : 100242647
Species vvi gma ghi zma bdi sbi osa sot sly cit mtr bra tae ath bna hvu ppo cre nta
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_019080756.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for XP_019080756.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_019080756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100242647


vvi-r.5
for
100242647


gma-u.5
for
100808394


ghi-r.1
for
107918830


zma-u.5
for
103650055


bdi-r.1
for
104582554



Ortholog ID: 19652
Species vvi gma ghi zma bdi
Symbol LOC100242647 LOC100808394 LOC107918830 LOC103650055 LOC104582554
Function* pentatricopeptide repeat-containing protein At2g22070 pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At2g22070 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At1g08070, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242647 100808394 107918830 103650055 104582554
The preparation time of this page was 0.1 [sec].