Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5  100244019  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 vvi-r.5  100244019  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 gma-u.5  100789865  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 gma-u.5  106795619  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 mtr-u.5  11431711  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 ghi-r.1  107943487  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 ghi-r.1  107955503  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 sly-u.5  101252092  pentatricopeptide repeat-containing protein At5g15340, mitochondrial 
 nta-r.1  107762915  pentatricopeptide repeat-containing protein At5g15340, mitochondrial-like 
 nta-r.1  107774989  pentatricopeptide repeat-containing protein At5g15340, mitochondrial-like 

close


Top 50 coexpressed genes to 100244019 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100244019 (vvi-u.5 coexpression data)

CoexMap"100244019"


vviLOC100244019 | Entrez gene ID : 100244019
Species vvi gma mtr ghi sly nta sbi osa sot cit bra tae ath bna hvu ppo zma cre bdi
Paralog 2 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002278719.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3  (predict for XP_002278719.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002278719.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-u.5
for
100244019


vvi-r.5
for
100244019


gma-u.5
for
100789865


gma-u.5
for
106795619


mtr-u.5
for
11431711


ghi-r.1
for
107943487


ghi-r.1
for
107955503


sly-u.5
for
101252092


nta-r.1
for
107762915


nta-r.1
for
107774989



Ortholog ID: 13452
Species vvi gma gma mtr ghi ghi sly nta nta
Symbol LOC100244019 LOC100789865 LOC106795619 LOC11431711 LOC107943487 LOC107955503 LOC101252092 LOC107762915 LOC107774989
Function* pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial pentatricopeptide repeat-containing protein At5g15340, mitochondrial-like pentatricopeptide repeat-containing protein At5g15340, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100244019 100789865 106795619 11431711 107943487 107955503 101252092 107762915 107774989
The preparation time of this page was 0.1 [sec].