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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100244583   protein LONG AFTER FAR-RED 3 
 vvi-r.5   100244583   protein LONG AFTER FAR-RED 3 
 vvi-m.5   100244583   protein LONG AFTER FAR-RED 3 
 ath-u.5   LAF3   Amidohydrolase family 
 gma-u.5   100786364   protein LONG AFTER FAR-RED 3 
 ppo-u.5   7460241   protein LONG AFTER FAR-RED 3 
 mtr-u.5   11421128   protein LONG AFTER FAR-RED 3 
 ghi-r.1   107962351   protein LONG AFTER FAR-RED 3 
 ghi-r.1   107928029   protein LONG AFTER FAR-RED 3 
 bna-r.1   106376614   protein LONG AFTER FAR-RED 3 
 bna-r.1   106445377   protein LONG AFTER FAR-RED 3 
 cit-r.1   102606925   protein LONG AFTER FAR-RED 3 
 sly-u.5   101256311   protein LONG AFTER FAR-RED 3 
 sot-r.1   102584635   putative amidohydrolase YtcJ 
 nta-r.1   107782929   protein LONG AFTER FAR-RED 3 
 osa-u.5   4325749   protein LONG AFTER FAR-RED 3 
 zma-u.5   100383761   Amidohydrolase family 
 tae-r.2   123072530   protein LONG AFTER FAR-RED 3 
 tae-r.2   123080748   protein LONG AFTER FAR-RED 3 
 hvu-r.1   123445542   protein LONG AFTER FAR-RED 3 
 sbi-r.1   8062334   putative amidohydrolase YtcJ 
 bdi-r.1   100840102   putative amidohydrolase YtcJ 
 cre-r.1   CHLRE_07g313350v5   uncharacterized protein 

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Top 50 coexpressed genes to 100244583 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100244583 (vvi-u.5 coexpression data)

CoexMap"100244583"


vviLOC100244583 | Entrez gene ID : 100244583      
Species vvi ath gma ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 3 1 1 1 1 2 2 1 1 1 1 1 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016810 [list] [network] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds  (122 genes)  IEA  
Protein XP_010645601.1 [sequence] [blastp]
XP_010645602.1 [sequence] [blastp]
XP_010645603.1 [sequence] [blastp]
XP_059598131.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  vacu 3,  plas 1,  E.R._vacu 1  (predict for XP_010645601.1)
chlo 4,  vacu 4,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for XP_010645602.1)
mito 4,  chlo 4,  cyto 1  (predict for XP_010645603.1)
chlo 4,  vacu 4,  plas 1,  nucl 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_059598131.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_010645601.1)
scret 9  (predict for XP_010645602.1)
other 5,  mito 4  (predict for XP_010645603.1)
scret 9  (predict for XP_059598131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100244583
vvi-r.5
for
100244583
vvi-m.5
for
100244583
ath-u.5
for
LAF3
gma-u.5
for
100786364
ppo-u.5
for
7460241
mtr-u.5
for
11421128
ghi-r.1
for
107962351
ghi-r.1
for
107928029
bna-r.1
for
106376614
bna-r.1
for
106445377
cit-r.1
for
102606925
sly-u.5
for
101256311
sot-r.1
for
102584635
nta-r.1
for
107782929
osa-u.5
for
4325749
zma-u.5
for
100383761
tae-r.2
for
123072530
tae-r.2
for
123080748
hvu-r.1
for
123445542
sbi-r.1
for
8062334
bdi-r.1
for
100840102
cre-r.1
for
CHLRE_07g313350v5


Ortholog ID: 9542
Species vvi ath gma ppo mtr ghi ghi bna bna cit sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100244583 LAF3 LOC100786364 LOC7460241 LOC11421128 LOC107962351 LOC107928029 LOC106376614 LOC106445377 LOC102606925 LOC101256311 LOC102584635 LOC107782929 LOC4325749 LOC100383761 LOC123072530 LOC123080748 LOC123445542 LOC8062334 LOC100840102 CHLRE_07g313350v5
Function* protein LONG AFTER FAR-RED 3 Amidohydrolase family protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 putative amidohydrolase YtcJ protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 Amidohydrolase family protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 protein LONG AFTER FAR-RED 3 putative amidohydrolase YtcJ putative amidohydrolase YtcJ uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 7
tae01200 Carbon metabolism 7
tae01230 Biosynthesis of amino acids 7
tae00030 Pentose phosphate pathway 4
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 4
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100244583 824751 100786364 7460241 11421128 107962351 107928029 106376614 106445377 102606925 101256311 102584635 107782929 4325749 100383761 123072530 123080748 123445542 8062334 100840102 66053943
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