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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248636   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 vvi-r.5   100248636   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 vvi-m.5   100248636   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 ath-u.5   AT3G04750   Tetratricopeptide repeat (TPR)-like superfamily protein 
 osa-u.5   9266678   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 zma-u.5   100281044   uncharacterized LOC100281044 

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Top 50 coexpressed genes to 100248636 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248636 (vvi-u.5 coexpression data)

CoexMap"100248636"


vviLOC100248636 | Entrez gene ID : 100248636    
Species vvi ath osa zma sot hvu tae cit sbi ppo sly gma ghi cre bna nta bdi bra mtr
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002275085.1 [sequence] [blastp]
XP_010659871.1 [sequence] [blastp]
XP_010659872.1 [sequence] [blastp]
XP_059598768.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto_mito 3,  nucl 2  (predict for XP_002275085.1)
mito 4,  chlo 3,  cyto_mito 3,  nucl 2  (predict for XP_010659871.1)
mito 4,  chlo 3,  cyto_mito 3,  nucl 2  (predict for XP_010659872.1)
mito 4,  chlo 3,  cyto_mito 3,  nucl 2  (predict for XP_059598768.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002275085.1)
mito 7  (predict for XP_010659871.1)
mito 7  (predict for XP_010659872.1)
mito 7  (predict for XP_059598768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248636

.
vvi-r.5
for
100248636

.
vvi-m.5
for
100248636

.
ath-u.5
for
AT3G04750

.
osa-u.5
for
9266678

.
zma-u.5
for
100281044

.


Ortholog ID: 14725
Species ath osa zma bra vvi sbi cit bdi
Symbol AT3G04750 LOC9266678 LOC100281044 LOC103849140 LOC100248636 LOC8060485 LOC102616557 LOC100820850
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g04750, mitochondrial uncharacterized LOC100281044 pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819635 9266678 100281044 103849140 100248636 8060485 102616557 100820850
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