Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100249582   pentatricopeptide repeat-containing protein At2g13600 
 vvi-r.5   100249582   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100795787   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100797008   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100789457   pentatricopeptide repeat-containing protein At2g13600 
 osa-u.5   4336784   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 zma-u.5   100304218   Pentatricopeptide repeat-containing protein 
 tae-r.2   123054549   pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 tae-r.2   123190406   pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 sbi-r.1   8060444   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 bdi-r.1   100844740   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 

close


Top 50 coexpressed genes to 100249582 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100249582 (vvi-u.5 coexpression data)

CoexMap"100249582"


vviLOC100249582 | Entrez gene ID : 100249582    
Species vvi gma osa zma tae sbi bdi cit sly sot mtr bra ath bna hvu ppo ghi cre nta
Paralog 2 3 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_019072030.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_019072030.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_019072030.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100249582
vvi-r.5
for
100249582
gma-u.5
for
100795787
gma-u.5
for
100797008
gma-u.5
for
100789457
osa-u.5
for
4336784
zma-u.5
for
100304218
tae-r.2
for
123054549
tae-r.2
for
123190406
sbi-r.1
for
8060444
bdi-r.1
for
100844740


Ortholog ID: 14487
Species vvi gma gma gma osa zma tae tae sbi bdi
Symbol LOC100249582 LOC100795787 LOC100797008 LOC100789457 LOC4336784 LOC100304218 LOC123054549 LOC123190406 LOC8060444 LOC100844740
Function* pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100249582 100795787 100797008 100789457 4336784 100304218 123054549 123190406 8060444 100844740
The preparation time of this page was 0.4 [sec].