ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100249674	uncharacterized LOC100249674
vvi-r.5	100249674	uncharacterized LOC100249674
vvi-m.5	100249674	uncharacterized LOC100249674
ath-u.5	AT3G52170	DNA binding protein
gma-u.5	100791460	uncharacterized LOC100791460
gma-u.5	100778620	uncharacterized LOC100778620
bra-r.6	103860748	uncharacterized LOC103860748
ppo-u.5	18101336	uncharacterized LOC18101336
ppo-u.5	112328771	uncharacterized LOC112328771
mtr-u.5	25484852	uncharacterized LOC25484852
ghi-r.1	107943609	uncharacterized LOC107943609
ghi-r.1	107922513	uncharacterized LOC107922513
bna-r.1	106445674	uncharacterized LOC106445674
bna-r.1	106390714	uncharacterized LOC106390714
bna-r.1	106448453	uncharacterized LOC106448453
cit-r.1	102619025	uncharacterized LOC102619025
sly-u.5	101259105	probable GPI-anchored adhesin-like protein PGA55
sot-r.1	102588960	uncharacterized LOC102588960
nta-r.1	107812931	uncharacterized LOC107812931
nta-r.1	107801062	uncharacterized LOC107801062
osa-u.5	4352388	uncharacterized LOC4352388
zma-u.5	100216720	uncharacterized LOC100216720
zma-u.5	100275620	uncharacterized LOC100275620
tae-r.2	123119865	uncharacterized LOC123119865
tae-r.2	123110852	uncharacterized LOC123110852
tae-r.2	123102668	uncharacterized LOC123102668
hvu-r.1	123452473	uncharacterized LOC123452473
sbi-r.1	8064620	uncharacterized LOC8064620
bdi-r.1	100838408	uncharacterized LOC100838408

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002270302.1 [sequence] [blastp]
XP_010646581.1 [sequence] [blastp]
XP_059598058.1 [sequence] [blastp]
XP_059598059.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 2, vacu 2, pero 2, cyto_pero 2	(predict for XP_002270302.1)
chlo 3, cyto 2, vacu 2, pero 2, cyto_pero 2	(predict for XP_010646581.1)
chlo 3, cyto 2, vacu 2, pero 2, cyto_pero 2	(predict for XP_059598058.1)
chlo 3, cyto 2, vacu 2, pero 2, cyto_pero 2	(predict for XP_059598059.1)

Subcellular
localization
TargetP

other 4	(predict for XP_002270302.1)
other 4	(predict for XP_010646581.1)
other 4	(predict for XP_059598058.1)
other 4	(predict for XP_059598059.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100249674	vvi-r.5 for 100249674	vvi-m.5 for 100249674	ath-u.5 for AT3G52170	gma-u.5 for 100791460	gma-u.5 for 100778620	bra-r.6 for 103860748	ppo-u.5 for 18101336	ppo-u.5 for 112328771	mtr-u.5 for 25484852	ghi-r.1 for 107943609	ghi-r.1 for 107922513	bna-r.1 for 106445674	bna-r.1 for 106390714	bna-r.1 for 106448453	cit-r.1 for 102619025	sly-u.5 for 101259105	sot-r.1 for 102588960	nta-r.1 for 107812931	nta-r.1 for 107801062	osa-u.5 for 4352388	zma-u.5 for 100216720	zma-u.5 for 100275620	tae-r.2 for 123119865	tae-r.2 for 123110852	tae-r.2 for 123102668	hvu-r.1 for 123452473	sbi-r.1 for 8064620	bdi-r.1 for 100838408

Ortholog

Ortholog ID: 8980

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100249674

DNA binding protein

uncharacterized LOC100791460

uncharacterized LOC100778620

uncharacterized LOC103860748

uncharacterized LOC18101336

uncharacterized LOC112328771

uncharacterized LOC25484852

uncharacterized LOC107943609

uncharacterized LOC107922513

uncharacterized LOC106445674

uncharacterized LOC106390714

uncharacterized LOC106448453

uncharacterized LOC102619025

probable GPI-anchored adhesin-like protein PGA55

uncharacterized LOC102588960

uncharacterized LOC107812931

uncharacterized LOC107801062

uncharacterized LOC4352388

uncharacterized LOC100216720

uncharacterized LOC100275620

uncharacterized LOC123119865

uncharacterized LOC123110852

uncharacterized LOC123102668

uncharacterized LOC123452473

uncharacterized LOC8064620

uncharacterized LOC100838408

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi00860	Porphyrin metabolism	2
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	5
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00620	Pyruvate metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00061	Fatty acid biosynthesis	3
osa01212	Fatty acid metabolism	3
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma03040	Spliceosome	3
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3
zma04141	Protein processing in endoplasmic reticulum	2
zma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00061	Fatty acid biosynthesis	2
bdi01212	Fatty acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100249674

824382

100791460

100778620

103860748

18101336

112328771

25484852

107943609

107922513

106445674

106390714

106448453

102619025

101259105

102588960

107812931

107801062

4352388

100216720

100275620

123119865

123110852

123102668

123452473

8064620

100838408

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100249674 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100249674 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	1	2	1	2	3	1	1	1	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100249674 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100249674 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**