ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100255598	uncharacterized LOC100255598
vvi-r.5	100255598	uncharacterized LOC100255598
vvi-u.5	100267277	uncharacterized LOC100267277
ath-u.5	AT5G58375	Methyltransferase-related protein
gma-u.5	100306028	uncharacterized LOC100306028
bra-r.6	103845264	uncharacterized LOC103845264
bra-r.6	103851162	uncharacterized LOC103851162
ppo-u.5	7489669	uncharacterized LOC7489669
ppo-u.5	7458823	uncharacterized LOC7458823
ppo-u.5	7491039	uncharacterized LOC7491039
mtr-u.5	11436856	uncharacterized LOC11436856
mtr-u.5	25481010	uncharacterized LOC25481010
mtr-u.5	25491034	uncharacterized LOC25491034
ghi-r.1	107904225	uncharacterized LOC107904225
ghi-r.1	107927110	uncharacterized LOC107927110
ghi-r.1	107930883	uncharacterized LOC107930883
bna-r.1	106386548	uncharacterized LOC106386548
bna-r.1	106387163	uncharacterized LOC106387163
bna-r.1	BNAA10G29670D	uncharacterized BNAA10G29670D
cit-r.1	102631421	hypothetical protein
cit-r.1	102620725	hypothetical protein
sly-u.5	101262017	uncharacterized LOC101262017
sot-r.1	102600787	uncharacterized LOC102600787
nta-r.1	107789851	uncharacterized LOC107789851
osa-u.5	4351306	uncharacterized LOC4351306
osa-u.5	4349593	uncharacterized LOC4349593
zma-u.5	100274929	uncharacterized LOC100274929
zma-u.5	100277703	uncharacterized LOC100277703
tae-r.2	123086472	uncharacterized LOC123086472
tae-r.2	123091522	uncharacterized LOC123091522
tae-r.2	123096483	uncharacterized LOC123096483
hvu-r.1	123395366	uncharacterized LOC123395366
hvu-r.1	123448061	uncharacterized LOC123448061
sbi-r.1	8074868	uncharacterized LOC8074868
bdi-r.1	100828537	uncharacterized LOC100828537
bdi-r.1	100829146	uncharacterized LOC100829146

Top 50 coexpressed genes to 100255598 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100255598 (vvi-u.5 coexpression data)

CoexMap"100255598"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002276860.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, extr 2, vacu 2

(predict for XP_002276860.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002276860.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100255598	vvi-r.5 for 100255598	vvi-u.5 for 100267277	ath-u.5 for AT5G58375	gma-u.5 for 100306028	bra-r.6 for 103845264	bra-r.6 for 103851162	ppo-u.5 for 7489669	ppo-u.5 for 7458823	ppo-u.5 for 7491039	mtr-u.5 for 11436856	mtr-u.5 for 25481010	mtr-u.5 for 25491034	ghi-r.1 for 107904225	ghi-r.1 for 107927110	ghi-r.1 for 107930883	bna-r.1 for 106386548	bna-r.1 for 106387163	bna-r.1 for BNAA10G29670D	cit-r.1 for 102631421	cit-r.1 for 102620725	sly-u.5 for 101262017	sot-r.1 for 102600787	nta-r.1 for 107789851	osa-u.5 for 4351306	osa-u.5 for 4349593	zma-u.5 for 100274929	zma-u.5 for 100277703	tae-r.2 for 123086472	tae-r.2 for 123091522	tae-r.2 for 123096483	hvu-r.1 for 123395366	hvu-r.1 for 123448061	sbi-r.1 for 8074868	bdi-r.1 for 100828537	bdi-r.1 for 100829146

Ortholog

Ortholog ID: 1995

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100255598

uncharacterized LOC100267277

Methyltransferase-related protein

uncharacterized LOC100526886

uncharacterized LOC106796583

uncharacterized LOC103845264

uncharacterized LOC103856696

uncharacterized LOC117132546

uncharacterized LOC7489669

uncharacterized LOC7458823

uncharacterized LOC7491039

uncharacterized LOC25481010

uncharacterized LOC11425295

uncharacterized LOC11412535

uncharacterized LOC107927110

uncharacterized LOC107930883

uncharacterized LOC106387771

uncharacterized LOC106391340

uncharacterized BNAC09G33850D

hypothetical protein

uncharacterized LOC101262017

uncharacterized LOC102600787

uncharacterized LOC107789851

uncharacterized LOC4351306

uncharacterized LOC4349593

uncharacterized LOC100274929

uncharacterized LOC100277703

uncharacterized LOC123086472

uncharacterized LOC123091522

uncharacterized LOC123124581

uncharacterized LOC123395366

uncharacterized LOC123448061

uncharacterized LOC8074868

uncharacterized LOC100828537

uncharacterized LOC100829146

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2
ath03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma04144	Endocytosis	3
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	8
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	3
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bna01240	Biosynthesis of cofactors	3
bna00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00020	Citrate cycle (TCA cycle)	4
nta01200	Carbon metabolism	4
nta01210	2-Oxocarboxylic acid metabolism	4
nta01230	Biosynthesis of amino acids	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00600	Sphingolipid metabolism	3
osa04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma01250	Biosynthesis of nucleotide sugars	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	4
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	4
bdi00600	Sphingolipid metabolism	2
bdi04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

100255598

100267277

835950

100526886

106796583

103845264

103856696

117132546

7489669

7458823

7491039

25481010

11425295

11412535

107927110

107930883

106387771

106391340

106435087

102631421

102620725

101262017

102600787

107789851

4351306

4349593

100274929

100277703

123086472

123091522

123124581

123395366

123448061

8074868

100828537

100829146

The preparation time of this page was 0.3 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	2	3	3	3	3	2	1	1	1	2	2	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100255598 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255598 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**