ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100255681	uncharacterized LOC100255681
vvi-r.5	100255681	uncharacterized LOC100255681
gma-u.5	100814892	uncharacterized LOC100814892
ppo-u.5	18097013	uncharacterized LOC18097013
mtr-u.5	112421313	uncharacterized LOC112421313
ghi-r.1	107890644	uncharacterized LOC107890644
ghi-r.1	107896520	uncharacterized LOC107896520
cit-r.1	102612569	uncharacterized LOC102612569
sly-u.5	101253709	uncharacterized LOC101253709
sot-r.1	102600840	uncharacterized LOC102600840
nta-r.1	107808086	uncharacterized LOC107808086
nta-r.1	107802363	uncharacterized LOC107802363

functional annotation

KEGG

GO BP

GO:0006338 [list] [network] chromatin remodeling

(98 genes)

IEA

GO CC

GO:0000812 [list] [network] Swr1 complex

(7 genes)

IEA

GO MF

GO:0031491 [list] [network] nucleosome binding	(27 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(811 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3261 genes)	IEA

Protein

XP_010662430.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1

(predict for XP_010662430.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_010662430.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100255681	vvi-r.5 for 100255681	gma-u.5 for 100814892	ppo-u.5 for 18097013	mtr-u.5 for 112421313	ghi-r.1 for 107890644	ghi-r.1 for 107896520	cit-r.1 for 102612569	sly-u.5 for 101253709	sot-r.1 for 102600840	nta-r.1 for 107808086	nta-r.1 for 107802363

Ortholog ID: 14982

Species

vvi

gma

ppo

mtr

ghi

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC100255681

uncharacterized LOC100814892

uncharacterized LOC18097013

uncharacterized LOC112421313

uncharacterized LOC107890644

uncharacterized LOC107896520

uncharacterized LOC102612569

uncharacterized LOC101253709

uncharacterized LOC102600840

uncharacterized LOC107808086

uncharacterized LOC107802363

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2
mtr00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100255681

100814892

18097013

112421313

107890644

107896520

102612569

101253709

102600840

107808086

107802363

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100255681 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255681 (vvi-u.5 coexpression data)


Species	vvi	gma	ppo	mtr	ghi	cit	sly	sot	nta	sbi	osa	bra	tae	ath	bna	hvu	zma	cre	bdi
Paralog	2	1	1	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100255681 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255681 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**