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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260559   pentatricopeptide repeat-containing protein At2g13600 
 vvi-r.5   100260559   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   106795994   pentatricopeptide repeat-containing protein At2g13600 
 gma-u.5   100796427   pentatricopeptide repeat-containing protein At2g13600 
 ppo-u.5   7496413   pentatricopeptide repeat-containing protein At2g13600 
 mtr-u.5   11434184   pentatricopeptide repeat-containing protein At2g13600 
 ghi-r.1   107929496   pentatricopeptide repeat-containing protein At2g13600 
 ghi-r.1   107947224   pentatricopeptide repeat-containing protein At2g13600 
 cit-r.1   102630713   pentatricopeptide repeat-containing protein At2g13600-like 
 sly-u.5   104646388   pentatricopeptide repeat-containing protein At2g13600-like 
 sot-r.1   102591563   pentatricopeptide repeat-containing protein At2g13600-like 
 nta-r.1   107763105   pentatricopeptide repeat-containing protein At2g13600-like 
 nta-r.1   107784934   pentatricopeptide repeat-containing protein At2g13600-like 

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Top 50 coexpressed genes to 100260559 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260559 (vvi-u.5 coexpression data)

CoexMap"100260559"


vviLOC100260559 | Entrez gene ID : 100260559      
Species vvi gma ppo mtr ghi cit sly sot nta sbi osa bra tae ath bna hvu zma cre bdi
Paralog 2 2 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010662900.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  plas 1,  cysk_nucl 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_010662900.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010662900.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260559
vvi-r.5
for
100260559
gma-u.5
for
106795994
gma-u.5
for
100796427
ppo-u.5
for
7496413
mtr-u.5
for
11434184
ghi-r.1
for
107929496
ghi-r.1
for
107947224
cit-r.1
for
102630713
sly-u.5
for
104646388
sot-r.1
for
102591563
nta-r.1
for
107763105
nta-r.1
for
107784934


Ortholog ID: 14571
Species vvi gma gma ppo mtr ghi ghi cit sly sot nta nta
Symbol LOC100260559 LOC106795994 LOC100796427 LOC7496413 LOC11434184 LOC107929496 LOC107947224 LOC102630713 LOC104646388 LOC102591563 LOC107763105 LOC107784934
Function* pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260559 106795994 100796427 7496413 11434184 107929496 107947224 102630713 104646388 102591563 107763105 107784934
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