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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 vvi-r.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 ath-u.5   AT1G06143   basic helix loop helix DNA-binding superfamily protein 
 bra-r.6   103843567   pentatricopeptide repeat-containing protein At1g06143 
 mtr-u.5   25498248   pentatricopeptide repeat-containing protein At1g06143 
 ghi-r.1   121204953   pentatricopeptide repeat-containing protein At1g06143 
 ghi-r.1   107915076   pentatricopeptide repeat-containing protein At1g06143 
 bna-r.1   125578644   pentatricopeptide repeat-containing protein At1g06143-like 
 bna-r.1   106419844   pentatricopeptide repeat-containing protein At1g06143-like 
 sly-u.5   101263971   pentatricopeptide repeat-containing protein At1g06143 

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Top 50 coexpressed genes to 100264065 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100264065 (vvi-u.5 coexpression data)

CoexMap"100264065"


vviLOC100264065 | Entrez gene ID : 100264065      
Species vvi ath bra mtr ghi bna sly sbi osa gma sot cit tae hvu ppo zma cre nta bdi
Paralog 2 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002282675.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_002282675.3)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_002282675.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100264065
vvi-r.5
for
100264065
ath-u.5
for
AT1G06143
bra-r.6
for
103843567
mtr-u.5
for
25498248
ghi-r.1
for
121204953
ghi-r.1
for
107915076
bna-r.1
for
125578644
bna-r.1
for
106419844
sly-u.5
for
101263971


Ortholog ID: 13238
Species vvi ath bra mtr ghi ghi bna bna sly
Symbol LOC100264065 AT1G06143 LOC103843567 LOC25498248 LOC121204953 LOC107915076 LOC125578644 LOC106419844 LOC101263971
Function* pentatricopeptide repeat-containing protein At1g06143 basic helix loop helix DNA-binding superfamily protein pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100264065 28716441 103843567 25498248 121204953 107915076 125578644 106419844 101263971
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