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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265654   pentatricopeptide repeat-containing protein At3g62890 
 vvi-r.5   100265654   pentatricopeptide repeat-containing protein At3g62890 
 vvi-u.5   100243334   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 sly-u.5   101248005   pentatricopeptide repeat-containing protein At2g20540-like 
 sot-r.1   102581947   pentatricopeptide repeat-containing protein At2g20540-like 
 nta-r.1   107799170   pentatricopeptide repeat-containing protein At2g20540-like 
 nta-r.1   107822479   pentatricopeptide repeat-containing protein At2g20540-like 

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Top 50 coexpressed genes to 100265654 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100265654 (vvi-u.5 coexpression data)

CoexMap"100265654"


vviLOC100265654 | Entrez gene ID : 100265654    
Species vvi sly sot nta sbi osa gma cit mtr bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002280289.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002280289.2)
Subcellular
localization
TargetP
mito 1  (predict for XP_002280289.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265654
vvi-r.5
for
100265654
vvi-u.5
for
100243334
sly-u.5
for
101248005
sot-r.1
for
102581947
nta-r.1
for
107799170
nta-r.1
for
107822479


Ortholog ID: 20303
Species vvi vvi sly sot nta nta
Symbol LOC100265654 LOC100243334 LOC101248005 LOC102581947 LOC107799170 LOC107822479
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At2g20540-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265654 100243334 101248005 102581947 107799170 107822479
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