Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100852840   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 
 vvi-r.5   100852840   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 
 ath-u.5   AT3G07290   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103849380   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 
 ghi-r.1   107952865   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 
 ghi-r.1   107954672   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 
 bna-r.1   106389710   pentatricopeptide repeat-containing protein At3g07290, mitochondrial-like 
 bna-r.1   125601817   pentatricopeptide repeat-containing protein At3g07290, mitochondrial-like 
 cit-r.1   102621200   pentatricopeptide repeat-containing protein At3g07290, mitochondrial 

close


Top 50 coexpressed genes to 100852840 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100852840 (vvi-u.5 coexpression data)

CoexMap"100852840"


vviLOC100852840 | Entrez gene ID : 100852840    
Species vvi ath bra ghi bna cit cre ppo hvu mtr nta tae bdi osa gma zma sly sot sbi
Paralog 2 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_003634842.3 [sequence] [blastp]
XP_010645291.2 [sequence] [blastp]
XP_059594208.1 [sequence] [blastp]
XP_059594209.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto_mito 3,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_003634842.3)
mito 4,  cyto_mito 3,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_010645291.2)
mito 4,  cyto_mito 3,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_059594208.1)
mito 4,  cyto_mito 3,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_059594209.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003634842.3)
mito 9  (predict for XP_010645291.2)
mito 9  (predict for XP_059594208.1)
mito 9  (predict for XP_059594209.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100852840
vvi-r.5
for
100852840
ath-u.5
for
AT3G07290
bra-r.6
for
103849380
ghi-r.1
for
107952865
ghi-r.1
for
107954672
bna-r.1
for
106389710
bna-r.1
for
125601817
cit-r.1
for
102621200


Ortholog ID: 16767
Species vvi ath bra ghi ghi bna bna cit
Symbol LOC100852840 AT3G07290 LOC103849380 LOC107952865 LOC107954672 LOC106389710 LOC125601817 LOC102621200
Function* pentatricopeptide repeat-containing protein At3g07290, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g07290, mitochondrial pentatricopeptide repeat-containing protein At3g07290, mitochondrial pentatricopeptide repeat-containing protein At3g07290, mitochondrial pentatricopeptide repeat-containing protein At3g07290, mitochondrial-like pentatricopeptide repeat-containing protein At3g07290, mitochondrial-like pentatricopeptide repeat-containing protein At3g07290, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03020 RNA polymerase 4
ghi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100852840 819917 103849380 107952865 107954672 106389710 125601817 102621200
The preparation time of this page was 0.1 [sec].