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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100853547   transcription factor LRL2 
 vvi-r.5   100853547   transcription factor LRL2 
 ath-u.5   AT5G64980   transcription factor 
 bra-r.6   103873934   uncharacterized LOC103873934 
 mtr-u.5   11431276   transcription factor bHLH7 
 ghi-r.1   107922816   transcription factor bHLH7 
 ghi-r.1   107912423   transcription factor LRL2 
 bna-r.1   106397743   uncharacterized LOC106397743 
 bna-r.1   106348003   uncharacterized LOC106348003 
 sly-u.5   101252325   transcription factor UNE12 
 sot-r.1   102578458   uncharacterized LOC102578458 
 nta-r.1   107789014   uncharacterized LOC107789014 
 nta-r.1   107795021   bHLH transcription factor RHL1-like 

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Top 50 coexpressed genes to 100853547 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100853547 (vvi-u.5 coexpression data)

CoexMap"100853547"


vviLOC100853547 | Entrez gene ID : 100853547      
Species vvi ath bra mtr ghi bna sly sot nta cre ppo hvu tae bdi osa gma zma cit sbi
Paralog 2 1 1 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (343 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (190 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (238 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (449 genes)  IEA  
Protein XP_003632365.2 [sequence] [blastp]
XP_010652139.1 [sequence] [blastp]
XP_010652140.1 [sequence] [blastp]
XP_019076463.1 [sequence] [blastp]
XP_059593823.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003632365.2)
nucl 8,  chlo 1,  pero 1,  cysk 1  (predict for XP_010652139.1)
nucl 7,  chlo 1,  cyto 1,  cysk 1,  golg_plas 1  (predict for XP_010652140.1)
nucl 10  (predict for XP_019076463.1)
nucl 7,  chlo 1,  cyto 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for XP_059593823.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_003632365.2)
other 4,  mito 3  (predict for XP_010652139.1)
other 4,  mito 3  (predict for XP_010652140.1)
other 7  (predict for XP_019076463.1)
other 4,  mito 3  (predict for XP_059593823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100853547
vvi-r.5
for
100853547
ath-u.5
for
AT5G64980
bra-r.6
for
103873934
mtr-u.5
for
11431276
ghi-r.1
for
107922816
ghi-r.1
for
107912423
bna-r.1
for
106397743
bna-r.1
for
106348003
sly-u.5
for
101252325
sot-r.1
for
102578458
nta-r.1
for
107789014
nta-r.1
for
107795021


Ortholog ID: 13470
Species vvi ath bra mtr ghi ghi bna bna sly sot nta nta
Symbol LOC100853547 AT5G64980 LOC103873934 LOC11431276 LOC107922816 LOC107912423 LOC106397743 LOC106348003 LOC101252325 LOC102578458 LOC107789014 LOC107795021
Function* transcription factor LRL2 transcription factor uncharacterized LOC103873934 transcription factor bHLH7 transcription factor bHLH7 transcription factor LRL2 uncharacterized LOC106397743 uncharacterized LOC106348003 transcription factor UNE12 uncharacterized LOC102578458 uncharacterized LOC107789014 bHLH transcription factor RHL1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00514 Other types of O-glycan biosynthesis 2
ghi00511 Other glycan degradation 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 3
ghi01040 Biosynthesis of unsaturated fatty acids 3
ghi01212 Fatty acid metabolism 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta03010 Ribosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853547 836622 103873934 11431276 107922816 107912423 106397743 106348003 101252325 102578458 107789014 107795021
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