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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100853811   pentatricopeptide repeat-containing protein At1g20230 
 vvi-r.5   100853811   pentatricopeptide repeat-containing protein At1g20230 
 gma-u.5   100785525   pentatricopeptide repeat-containing protein At1g20230 
 mtr-u.5   11435877   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sly-u.5   101258616   pentatricopeptide repeat-containing protein At1g20230-like 
 sot-r.1   102597064   pentatricopeptide repeat-containing protein At1g20230-like 
 nta-r.1   107766589   pentatricopeptide repeat-containing protein At1g20230-like 
 nta-r.1   107766590   pentatricopeptide repeat-containing protein At1g20230-like 

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Top 50 coexpressed genes to 100853811 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100853811 (vvi-u.5 coexpression data)

CoexMap"100853811"


vviLOC100853811 | Entrez gene ID : 100853811      
Species vvi gma mtr sly sot nta sbi osa cit bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002263297.1 [sequence] [blastp]
XP_010645114.1 [sequence] [blastp]
XP_059591446.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  nucl 1,  extr 1,  vacu 1  (predict for XP_002263297.1)
chlo 5,  cyto 3,  nucl 1,  extr 1,  vacu 1  (predict for XP_010645114.1)
chlo 5,  cyto 3,  nucl 1,  extr 1,  vacu 1  (predict for XP_059591446.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_002263297.1)
other 3,  mito 3  (predict for XP_010645114.1)
other 3,  mito 3  (predict for XP_059591446.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100853811
vvi-r.5
for
100853811
gma-u.5
for
100785525
mtr-u.5
for
11435877
sly-u.5
for
101258616
sot-r.1
for
102597064
nta-r.1
for
107766589
nta-r.1
for
107766590


Ortholog ID: 17779
Species vvi gma mtr sly sot nta nta
Symbol LOC100853811 LOC100785525 LOC11435877 LOC101258616 LOC102597064 LOC107766589 LOC107766590
Function* pentatricopeptide repeat-containing protein At1g20230 pentatricopeptide repeat-containing protein At1g20230 pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853811 100785525 11435877 101258616 102597064 107766589 107766590
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