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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   104879546   pentatricopeptide repeat-containing protein At4g11690 
 vvi-r.5   104879546   pentatricopeptide repeat-containing protein At4g11690 
 gma-u.5   100817044   pentatricopeptide repeat-containing protein At4g11690 
 gma-u.5   100819169   pentatricopeptide repeat-containing protein At4g11690 
 bra-r.6   103849364   pentatricopeptide repeat-containing protein At4g11690 
 mtr-u.5   25495670   pentatricopeptide repeat-containing protein At4g11690 
 ghi-r.1   107950162   pentatricopeptide repeat-containing protein At4g11690-like 
 bna-r.1   106422286   pentatricopeptide repeat-containing protein At4g11690-like 
 bna-r.1   106416679   pentatricopeptide repeat-containing protein At4g11690 
 cit-r.1   102619343   pentatricopeptide repeat-containing protein At4g11690 
 sot-r.1   102603994   pentatricopeptide repeat-containing protein At4g11690 
 nta-r.1   107766125   uncharacterized LOC107766125 
 nta-r.1   107806536   uncharacterized LOC107806536 

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Top 50 coexpressed genes to 104879546 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104879546 (vvi-u.5 coexpression data)

CoexMap""


vviLOC104879546 | Entrez gene ID : 104879546    
Species vvi gma bra mtr ghi bna cit sot nta tae bdi hvu sly ath osa sbi zma cre ppo
Paralog 2 2 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At4g11690
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010651016.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  chlo 2,  nucl 1,  vacu 1,  cyto 1,  plas 1,  E.R. 1,  cysk_nucl 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_010651016.1)
Subcellular
localization
TargetP
chlo 1  (predict for XP_010651016.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
104879546
vvi-r.5
for
104879546
gma-u.5
for
100817044
gma-u.5
for
100819169
bra-r.6
for
103849364
mtr-u.5
for
25495670
ghi-r.1
for
107950162
bna-r.1
for
106422286
bna-r.1
for
106416679
cit-r.1
for
102619343
sot-r.1
for
102603994
nta-r.1
for
107766125
nta-r.1
for
107806536

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Ortholog ID: 13174
Species vvi gma gma bra mtr ghi bna bna cit sot nta nta
Symbol LOC104879546 LOC100817044 LOC100819169 LOC103849364 LOC25495670 LOC107950162 LOC106422286 LOC106416679 LOC102619343 LOC102603994 LOC107766125 LOC107806536
Function* pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690-like pentatricopeptide repeat-containing protein At4g11690-like pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 uncharacterized LOC107766125 uncharacterized LOC107806536
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra00966 Glucosinolate biosynthesis 5
bra01210 2-Oxocarboxylic acid metabolism 5
bra00270 Cysteine and methionine metabolism 4
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104879546 100817044 100819169 103849364 25495670 107950162 106422286 106416679 102619343 102603994 107766125 107806536
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