ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-m.5	100192995	Senescence-associated protein 5
zma-u.5	100192995	Senescence-associated protein 5
zma-r.6	100192995	Senescence-associated protein 5
zma-u.5	100191693	uncharacterized LOC100191693
sbi-r.1	8073762	tetraspanin-2
sbi-r.1	8079303	tetraspanin-2
osa-u.5	4341357	tetraspanin-2
osa-u.5	4328748	tetraspanin-2
tae-r.2	123127319	tetraspanin-2
tae-r.2	123136996	tetraspanin-2
tae-r.2	123136997	tetraspanin-2
hvu-r.1	123403363	tetraspanin-2-like
bdi-r.1	104581533	tetraspanin-2
bdi-r.1	100835423	tetraspanin-2
ath-u.5	TET2	tetraspanin2
gma-u.5	100815633	tetraspanin-2
sly-u.5	101264443	tetraspanin-2
sly-u.5	101258629	tetraspanin-2-like
bra-r.6	103837966	tetraspanin-2
bra-r.6	103842634	tetraspanin-2
vvi-u.5	100262870	tetraspanin-2
ppo-u.5	7497618	tetraspanin-2
mtr-u.5	11430158	tetraspanin-2
ghi-r.1	107937708	tetraspanin-2
ghi-r.1	121219217	tetraspanin-2
ghi-r.1	107932274	tetraspanin-2
bna-r.1	106375518	tetraspanin-2-like
bna-r.1	106368921	tetraspanin-2
bna-r.1	106376209	tetraspanin-2
sot-r.1	102591130	tetraspanin-2-like
sot-r.1	102598685	tetraspanin-2-like
cit-r.1	102608710	tetraspanin-2
nta-r.1	107759939	tetraspanin-2-like
nta-r.1	107769712	tetraspanin-2-like
nta-r.1	107790079	tetraspanin-2-like

Annotation

functional annotation

KEGG

GO BP

GO:0009734 [list] [network] auxin-activated signaling pathway

(31 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

Protein

NP_001131638.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, extr 3, chlo_mito 3

(predict for NP_001131638.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001131638.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-m.5 for 100192995	zma-u.5 for 100192995	zma-r.6 for 100192995	zma-u.5 for 100191693	sbi-r.1 for 8073762	sbi-r.1 for 8079303	osa-u.5 for 4341357	osa-u.5 for 4328748	tae-r.2 for 123127319	tae-r.2 for 123136996	tae-r.2 for 123136997	hvu-r.1 for 123403363	bdi-r.1 for 104581533	bdi-r.1 for 100835423	ath-u.5 for TET2	gma-u.5 for 100815633	sly-u.5 for 101264443	sly-u.5 for 101258629	bra-r.6 for 103837966	bra-r.6 for 103842634	vvi-u.5 for 100262870	ppo-u.5 for 7497618	mtr-u.5 for 11430158	ghi-r.1 for 107937708	ghi-r.1 for 121219217	ghi-r.1 for 107932274	bna-r.1 for 106375518	bna-r.1 for 106368921	bna-r.1 for 106376209	sot-r.1 for 102591130	sot-r.1 for 102598685	cit-r.1 for 102608710	nta-r.1 for 107759939	nta-r.1 for 107769712	nta-r.1 for 107790079

Ortholog

Ortholog ID: 3905

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

TET2

Function^*

Senescence-associated protein 5

uncharacterized LOC100191693

tetraspanin-2

tetraspanin-2-like

tetraspanin-2

tetraspanin2

tetraspanin-2

tetraspanin-2-like

tetraspanin-2

tetraspanin-2-like

tetraspanin-2

tetraspanin-2-like

tetraspanin-2

tetraspanin-2-like

tetraspanin-2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03040	Spliceosome	2
sbi04144	Endocytosis	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00966	Glucosinolate biosynthesis	2
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2
ghi00906	Carotenoid biosynthesis	2
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100192995

100191693

8073762

8079303

4341357

4328748

123127319

123144396

123165561

123403363

104581533

100835423

816477

100815633

101264443

101258629

103837966

103842634

100262870

7497618

11430158

121219217

107932274

107907147

106376209

106447125

106400857

102591130

102598685

102608710

107759939

107769712

107805103

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100192995 (zma-m.5 coexpression data)

Top 50 enrichment test to 100192995 (zma-m.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	3	1	2	1	1	2	2	1	1	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192995 (zma-m.5 coexpression data)

Top 50 enrichment test to 100192995 (zma-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**