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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   100282345   uncharacterized LOC100282345 
 zma-u.5   100282345   uncharacterized LOC100282345 
 zma-r.6   100282345   uncharacterized LOC100282345 
 osa-u.5   4346400   protein DCL homolog, chloroplastic 
 tae-r.2   123103289   protein DCL homolog, chloroplastic 
 tae-r.2   123111482   protein DCL homolog, chloroplastic 
 tae-r.2   123124637   protein DCL homolog, chloroplastic 
 hvu-r.1   123396067   protein DCL homolog, chloroplastic-like 
 bdi-r.1   100842683   protein DCL, chloroplastic 

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Top 50 coexpressed genes to 100282345 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100282345 (zma-m.5 coexpression data)

CoexMap"100282345"


zmaLOC100282345 | Entrez gene ID : 100282345      
Species zma osa tae hvu bdi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot sbi
Paralog 3 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (20 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (67 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (803 genes)  IEA  
GO MF
Protein NP_001148729.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  plas 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_001148729.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for NP_001148729.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
100282345
zma-u.5
for
100282345
zma-r.6
for
100282345
osa-u.5
for
4346400
tae-r.2
for
123103289
tae-r.2
for
123111482
tae-r.2
for
123124637
hvu-r.1
for
123396067
bdi-r.1
for
100842683


Ortholog ID: 18499
Species zma osa tae tae tae hvu bdi
Symbol LOC100282345 LOC4346400 LOC123103289 LOC123111482 LOC123124637 LOC123396067 LOC100842683
Function* uncharacterized LOC100282345 protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic-like protein DCL, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100282345 4346400 123103289 123111482 123124637 123396067 100842683
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