ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-m.5	103636097	protein SGT1 homolog
zma-u.5	103636097	protein SGT1 homolog
zma-r.6	103636097	protein SGT1 homolog
zma-u.5	100282745	uncharacterized LOC100282745
sbi-r.1	8084854	protein SGT1 homolog
osa-u.5	4326682	protein SGT1 homolog
tae-r.2	123070173	protein SGT1 homolog
tae-r.2	123061535	protein SGT1 homolog
tae-r.2	100049034	protein SGT1 homolog
hvu-r.1	123443917	protein SGT1 homolog
bdi-r.1	100838478	protein SGT1 homolog
ath-u.5	SGT1B	phosphatase-like protein
ath-u.5	SGT1A	phosphatase-like protein
gma-u.5	100784022	protein SGT1 homolog A
gma-u.5	100780174	protein SGT1 homolog
gma-u.5	100777554	protein SGT1 homolog B-like
sly-u.5	101258374	protein SGT1 homolog A-like
bra-r.6	103833887	protein SGT1 homolog B
bra-r.6	103858599	protein SGT1 homolog B
bra-r.6	103861407	protein SGT1 homolog A
vvi-u.5	100244083	protein SGT1 homolog
ppo-u.5	7468358	protein SGT1 homolog
ppo-u.5	18106438	protein SGT1 homolog
mtr-u.5	25496516	protein SGT1 homolog A
mtr-u.5	11436240	protein SGT1 homolog A
ghi-r.1	107951829	protein SGT1 homolog B
ghi-r.1	107944433	protein SGT1 homolog B
ghi-r.1	107942356	protein SGT1 homolog B
bna-r.1	106445172	protein SGT1 homolog B-like
bna-r.1	106440530	protein SGT1 homolog A
bna-r.1	106438799	protein SGT1 homolog B
sot-r.1	102579484	protein SGT1 homolog A-like
sot-r.1	102599444	protein SGT1 homolog
cit-r.1	102623505	protein SGT1 homolog B
nta-r.1	107809968	protein SGT1 homolog
nta-r.1	107786122	protein SGT1 homolog
cre-r.1	CHLRE_12g513600v5	uncharacterized protein

Top 50 coexpressed genes to 103636097 (zma-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103636097 (zma-m.5 coexpression data)

CoexMap"103636097"

[Cytoscape]

Annotation

functional annotation

KEGG

zma04626 [list] [network] Plant-pathogen interaction (264 genes)

GO BP

GO CC

GO MF

GO:0051087 [list] [network] protein-folding chaperone binding

(88 genes)

IEA

Protein

NP_001412411.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_001412411.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001412411.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-m.5 for 103636097	zma-u.5 for 103636097	zma-r.6 for 103636097	zma-u.5 for 100282745	sbi-r.1 for 8084854	osa-u.5 for 4326682	tae-r.2 for 123070173	tae-r.2 for 123061535	tae-r.2 for 100049034	hvu-r.1 for 123443917	bdi-r.1 for 100838478	ath-u.5 for SGT1B	ath-u.5 for SGT1A	gma-u.5 for 100784022	gma-u.5 for 100780174	gma-u.5 for 100777554	sly-u.5 for 101258374	bra-r.6 for 103833887	bra-r.6 for 103858599	bra-r.6 for 103861407	vvi-u.5 for 100244083	ppo-u.5 for 7468358	ppo-u.5 for 18106438	mtr-u.5 for 25496516	mtr-u.5 for 11436240	ghi-r.1 for 107951829	ghi-r.1 for 107944433	ghi-r.1 for 107942356	bna-r.1 for 106445172	bna-r.1 for 106440530	bna-r.1 for 106438799	sot-r.1 for 102579484	sot-r.1 for 102599444	cit-r.1 for 102623505	nta-r.1 for 107809968	nta-r.1 for 107786122	cre-r.1 for CHLRE_12g513600v5

Ortholog

Ortholog ID: 3954

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SGT1B

SGT1A

Function^*

protein SGT1 homolog

uncharacterized LOC100282745

protein SGT1 homolog

phosphatase-like protein

protein SGT1 homolog B-like

SGT1-2

SGT1-1

protein SGT1 homolog A-like

protein SGT1 homolog B

protein SGT1 homolog A

protein SGT1 homolog

protein SGT1 homolog A

protein SGT1 homolog B

protein SGT1 homolog A

protein SGT1 homolog B

protein SGT1 homolog A-like

protein SGT1 homolog

protein SGT1 homolog B

protein SGT1 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5
osa04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04130	SNARE interactions in vesicular transport	2
hvu04626	Plant-pathogen interaction	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	5
bdi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03040	Spliceosome	3
ath04144	Endocytosis	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	9
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	5
bra04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6
vvi04626	Plant-pathogen interaction	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	3
ppo04144	Endocytosis	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	5
mtr04141	Protein processing in endoplasmic reticulum	4
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	4
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03060	Protein export	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	5
bna00053	Ascorbate and aldarate metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	5
bna04626	Plant-pathogen interaction	4
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04141	Protein processing in endoplasmic reticulum	4
nta04144	Endocytosis	4
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04141	Protein processing in endoplasmic reticulum	4
nta04144	Endocytosis	4
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	7
cre03040	Spliceosome	2
cre04144	Endocytosis	2
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

103636097

100282745

8084854

4326682

123070173

123061535

100049034

123443917

100838478

826728

828457

100777554

100194421

100194420

101258374

103833887

103858599

103861407

100244083

7468358

18106438

25496516

11436240

107942356

107917913

107914611

106440530

106422380

106366226

102579484

102599444

102623505

107809968

107786122

5728516

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	1	3	1	1	2	3	1	3	1	2	2	3	3	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103636097 (zma-m.5 coexpression data)

Top 50 enrichment test to 103636097 (zma-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**