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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   103649543   Activating signal cointegrator 1 complex subunit 1 
 zma-u.5   103649543   Activating signal cointegrator 1 complex subunit 1 
 zma-r.6   103649543   Activating signal cointegrator 1 complex subunit 1 
 sbi-r.1   8078103   activating signal cointegrator 1 complex subunit 1 
 osa-u.5   4325894   uncharacterized LOC4325894 
 osa-u.5   4325893   uncharacterized LOC4325893 
 tae-r.2   123060803   activating signal cointegrator 1 complex subunit 1 
 tae-r.2   123069365   activating signal cointegrator 1 complex subunit 1 
 hvu-r.1   123443263   activating signal cointegrator 1 complex subunit 1 
 bdi-r.1   100837554   activating signal cointegrator 1 complex subunit 1 
 ath-u.5   AT3G16220   Putative eukaryotic LigT 
 ath-u.5   AT3G16230   Putative eukaryotic LigT 
 gma-u.5   100785531   uncharacterized LOC100785531 
 sly-u.5   101249781   uncharacterized LOC101249781 
 sly-u.5   101268850   uncharacterized LOC101268850 
 bra-r.6   103859659   activating signal cointegrator 1 complex subunit 1 
 bra-r.6   103840105   uncharacterized LOC103840105 
 bra-r.6   103840113   uncharacterized LOC103840113 
 vvi-u.5   100266864   uncharacterized LOC100266864 
 ppo-u.5   7475086   uncharacterized LOC7475086 
 mtr-u.5   11420973   uncharacterized LOC11420973 
 ghi-r.1   107891710   uncharacterized LOC107891710 
 ghi-r.1   107889109   uncharacterized LOC107889109 
 ghi-r.1   107950695   uncharacterized LOC107950695 
 bna-r.1   106373775   uncharacterized LOC106373775 
 bna-r.1   106356377   uncharacterized LOC106356377 
 bna-r.1   106358143   activating signal cointegrator 1 complex subunit 1 
 sot-r.1   102596069   activating signal cointegrator 1 complex subunit 1 
 sot-r.1   102605557   activating signal cointegrator 1 complex subunit 1-like 
 cit-r.1   102623371   uncharacterized LOC102623371 
 nta-r.1   107817119   uncharacterized LOC107817119 
 nta-r.1   107814231   uncharacterized LOC107814231 
 nta-r.1   107802500   uncharacterized LOC107802500 
 cre-r.1   CHLRE_01g008000v5   uncharacterized protein 

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Top 50 coexpressed genes to 103649543 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103649543 (zma-m.5 coexpression data)

CoexMap"103649543"


zmaLOC103649543 | Entrez gene ID : 103649543      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 2 2 1 1 2 1 2 3 1 1 1 3 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006307 [list] [network] DNA alkylation repair  (5 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
Protein XP_008673481.1 [sequence] [blastp]
XP_008673482.1 [sequence] [blastp]
XP_008673483.1 [sequence] [blastp]
XP_008673484.1 [sequence] [blastp]
XP_008673485.1 [sequence] [blastp]
XP_020406809.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_008673481.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_008673482.1)
chlo 7,  chlo_mito 5,  mito 2  (predict for XP_008673483.1)
nucl 5,  cyto_nucl 3,  chlo 2,  mito 1  (predict for XP_008673484.1)
nucl 5,  cyto_nucl 3,  chlo 2,  mito 1  (predict for XP_008673485.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_020406809.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_008673481.1)
mito 8  (predict for XP_008673482.1)
mito 8  (predict for XP_008673483.1)
other 4,  chlo 3  (predict for XP_008673484.1)
other 4,  chlo 3  (predict for XP_008673485.1)
mito 8  (predict for XP_020406809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
103649543
zma-u.5
for
103649543
zma-r.6
for
103649543
sbi-r.1
for
8078103
osa-u.5
for
4325894
osa-u.5
for
4325893
tae-r.2
for
123060803
tae-r.2
for
123069365
hvu-r.1
for
123443263
bdi-r.1
for
100837554
ath-u.5
for
AT3G16220
ath-u.5
for
AT3G16230
gma-u.5
for
100785531
sly-u.5
for
101249781
sly-u.5
for
101268850
bra-r.6
for
103859659
bra-r.6
for
103840105
bra-r.6
for
103840113
vvi-u.5
for
100266864
ppo-u.5
for
7475086
mtr-u.5
for
11420973
ghi-r.1
for
107891710
ghi-r.1
for
107889109
ghi-r.1
for
107950695
bna-r.1
for
106373775
bna-r.1
for
106356377
bna-r.1
for
106358143
sot-r.1
for
102596069
sot-r.1
for
102605557
cit-r.1
for
102623371
nta-r.1
for
107817119
nta-r.1
for
107814231
nta-r.1
for
107802500
cre-r.1
for
CHLRE_01g008000v5


Ortholog ID: 4548
Species zma sbi osa osa tae tae hvu bdi ath ath gma sly sly bra bra bra vvi ppo mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC103649543 LOC8078103 LOC4325894 LOC4325893 LOC123060803 LOC123069365 LOC123443263 LOC100837554 AT3G16220 AT3G16230 LOC100785531 LOC101249781 LOC101268850 LOC103859659 LOC103840105 LOC103840113 LOC100266864 LOC7475086 LOC11420973 LOC107891710 LOC107889109 LOC107950695 LOC106373775 LOC106358143 LOC106439436 LOC102596069 LOC102605557 LOC102623371 LOC107817119 LOC107814231 LOC107802500 CHLRE_01g008000v5
Function* Activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 uncharacterized LOC4325894 uncharacterized LOC4325893 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 Putative eukaryotic LigT Putative eukaryotic LigT uncharacterized LOC100785531 uncharacterized LOC101249781 uncharacterized LOC101268850 activating signal cointegrator 1 complex subunit 1 uncharacterized LOC103840105 uncharacterized LOC103840113 uncharacterized LOC100266864 uncharacterized LOC7475086 uncharacterized LOC11420973 uncharacterized LOC107891710 uncharacterized LOC107889109 uncharacterized LOC107950695 uncharacterized LOC106373775 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1-like uncharacterized LOC102623371 uncharacterized LOC107817119 uncharacterized LOC107814231 uncharacterized LOC107802500 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103649543 8078103 4325894 4325893 123060803 123069365 123443263 100837554 820868 820869 100785531 101249781 101268850 103859659 103840105 103840113 100266864 7475086 11420973 107891710 107889109 107950695 106373775 106358143 106439436 102596069 102605557 102623371 107817119 107814231 107802500 5725856
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