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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   541680   uncharacterized LOC541680 
 zma-u.5   541680   uncharacterized LOC541680 
 zma-r.6   541680   uncharacterized LOC541680 
 zma-u.5   100280613   uncharacterized LOC100280613 
 sbi-r.1   8076414   RPM1-interacting protein 4 
 osa-u.5   4346523   protein NOI4 
 osa-u.5   9270755   protein NOI4 
 tae-r.2   123150230   protein NOI4 
 tae-r.2   123157785   uncharacterized LOC123157785 
 tae-r.2   123165937   protein NOI4 
 hvu-r.1   123410149   protein NOI4-like 
 bdi-r.1   100826114   uncharacterized LOC100826114 
 ath-u.5   AT2G04410   RPM1-interacting protein 4 (RIN4) family protein 
 ath-u.5   NOI   RPM1-interacting protein 4 (RIN4) family protein 
 sly-u.5   101263133   protein NOI4 
 sly-u.5   101254747   protein NOI4 
 bra-r.6   103856963   protein NOI4 
 bra-r.6   103851860   protein NOI4 
 vvi-u.5   100241554   protein NOI4 
 ppo-u.5   7487551   protein NOI4 
 ppo-u.5   7469337   protein NOI4 
 ppo-u.5   7471880   protein NOI4 
 mtr-u.5   112419906   protein NOI4 
 mtr-u.5   11439904   protein NOI4 
 ghi-r.1   107903385   protein NOI4 
 ghi-r.1   107912466   protein NOI4 
 ghi-r.1   107913337   protein NOI4 
 bna-r.1   111204363   protein NOI4 
 bna-r.1   106447645   protein NOI4-like 
 sot-r.1   102602287   RPM1-interacting protein 4-like 
 sot-r.1   102601187   RPM1-interacting protein 4 
 sot-r.1   102581058   RPM1-interacting protein 4 
 cit-r.1   102627443   protein NOI4 
 cit-r.1   102611736   protein NOI4 
 nta-r.1   107803671   protein NOI4-like 
 nta-r.1   107765598   protein NOI4-like 
 nta-r.1   107769717   protein NOI4 

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Top 50 coexpressed genes to 541680 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541680 (zma-m.5 coexpression data)

CoexMap"541680"


zmaLOC541680 | Entrez gene ID : 541680      
Species zma sbi osa tae hvu bdi ath sly bra vvi ppo mtr ghi bna sot cit nta cre gma
Paralog 4 1 2 3 1 1 2 2 2 1 3 2 3 2 3 2 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001104900.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001104900.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001104900.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
541680
zma-u.5
for
541680
zma-r.6
for
541680
zma-u.5
for
100280613
sbi-r.1
for
8076414
osa-u.5
for
4346523
osa-u.5
for
9270755
tae-r.2
for
123150230
tae-r.2
for
123157785
tae-r.2
for
123165937
hvu-r.1
for
123410149
bdi-r.1
for
100826114
ath-u.5
for
AT2G04410
ath-u.5
for
NOI
sly-u.5
for
101263133
sly-u.5
for
101254747
bra-r.6
for
103856963
bra-r.6
for
103851860
vvi-u.5
for
100241554
ppo-u.5
for
7487551
ppo-u.5
for
7469337
ppo-u.5
for
7471880
mtr-u.5
for
112419906
mtr-u.5
for
11439904
ghi-r.1
for
107903385
ghi-r.1
for
107912466
ghi-r.1
for
107913337
bna-r.1
for
111204363
bna-r.1
for
106447645
sot-r.1
for
102602287
sot-r.1
for
102601187
sot-r.1
for
102581058
cit-r.1
for
102627443
cit-r.1
for
102611736
nta-r.1
for
107803671
nta-r.1
for
107765598
nta-r.1
for
107769717


Ortholog ID: 1529
Species zma zma sbi osa osa tae tae tae hvu bdi ath sly sly bra bra bra vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna sot sot sot cit cit nta nta
Symbol LOC541680 LOC100280613 LOC8076414 LOC4346523 LOC9270755 LOC123150230 LOC123157785 LOC123165937 LOC123410149 LOC100826114 NOI LOC101263133 LOC101254747 LOC103856963 LOC103851860 LOC103845026 LOC100241554 LOC7487551 LOC7469337 LOC7471880 LOC112419906 LOC11439904 LOC107912466 LOC107913337 LOC107922044 LOC111204363 LOC106447645 LOC102602287 LOC102578995 LOC102588940 LOC102627443 LOC102611736 LOC107803671 LOC107795462
Function* uncharacterized LOC541680 uncharacterized LOC100280613 RPM1-interacting protein 4 protein NOI4 protein NOI4 protein NOI4 uncharacterized LOC123157785 protein NOI4 protein NOI4-like uncharacterized LOC100826114 RPM1-interacting protein 4 (RIN4) family protein protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4 protein NOI4-like RPM1-interacting protein 4-like RPM1-interacting protein 4-like RPM1-interacting protein 4 protein NOI4 protein NOI4 protein NOI4-like protein NOI4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 4
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa01240 Biosynthesis of cofactors 2
osa00053 Ascorbate and aldarate metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 5
tae01240 Biosynthesis of cofactors 5
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00920 Sulfur metabolism 2
hvu04122 Sulfur relay system 2
hvu00071 Fatty acid degradation 2
hvu00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi04144 Endocytosis 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03083 Polycomb repressive complex 6
ghi04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03420 Nucleotide excision repair 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 541680 100280613 8076414 4346523 9270755 123150230 123157785 123165937 123410149 100826114 835679 101263133 101254747 103856963 103851860 103845026 100241554 7487551 7469337 7471880 112419906 11439904 107912466 107913337 107922044 111204363 106447645 102602287 102578995 102588940 102627443 102611736 107803671 107795462
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