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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   542280   embryo specific protein 5 
 zma-u.5   542280   embryo specific protein 5 
 zma-r.6   542280   embryo specific protein 5 
 zma-u.5   542384   embryo specific protein 1 
 osa-u.5   4338499   embryonic abundant protein 1-like 
 tae-r.2   123052759   late embryogenesis abundant protein B19.1A 
 tae-r.2   123052716   late embryogenesis abundant protein B19.3 
 bdi-r.1   100841330   late embryogenesis abundant protein B19.3 
 bdi-r.1   104582704   em protein H5 
 ath-u.5   EM1   Stress induced protein 
 ath-u.5   GEA6   Stress induced protein 
 gma-u.5   SLE3   protein SLE3 
 gma-u.5   SLE1   Soybean group-1 late embryogenesis abundant protein 1 
 sly-u.5   101252190   em protein H5 
 sly-u.5   101247056   carrot ABA-induced in somatic embryos 3-like 
 bra-r.6   103857913   late seed maturation protein P8B6 
 bra-r.6   103866975   late seed maturation protein P8B6 
 bra-r.6   103848642   em-like protein GEA1 
 vvi-u.5   100255849   late embryogenesis abundant protein B19.3 
 vvi-u.5   100265515   protein EMB-1 
 mtr-u.5   11409219   protein SLE2 
 ghi-r.1   107948294   em protein H5 
 ghi-r.1   107937048   protein SLE1 
 ghi-r.1   107890949   protein SLE1 
 bna-r.1   106349060   em-like protein GEA1 
 bna-r.1   106438038   late seed maturation protein P8B6 
 bna-r.1   106397804   late seed maturation protein P8B6 
 cit-r.1   102615821   protein SLE2 
 cit-r.1   107178010   late embryogenesis abundant protein EMB564 
 nta-r.1   107761161   em protein H5 

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Top 50 coexpressed genes to 542280 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542280 (zma-m.5 coexpression data)

CoexMap"542280"


zmaLOC542280 | Entrez gene ID : 542280      
Species zma osa tae bdi ath gma sly bra vvi mtr ghi bna cit nta sbi cre ppo sot hvu
Paralog 4 1 2 2 2 2 2 3 2 1 3 3 2 1 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009737 [list] [network] response to abscisic acid  (53 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO MF
Protein NP_001105349.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001105349.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001105349.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
542280
zma-u.5
for
542280
zma-r.6
for
542280
zma-u.5
for
542384
osa-u.5
for
4338499
tae-r.2
for
123052759
tae-r.2
for
123052716
bdi-r.1
for
100841330
bdi-r.1
for
104582704
ath-u.5
for
EM1
ath-u.5
for
GEA6
gma-u.5
for
SLE3
gma-u.5
for
SLE1
sly-u.5
for
101252190
sly-u.5
for
101247056
bra-r.6
for
103857913
bra-r.6
for
103866975
bra-r.6
for
103848642
vvi-u.5
for
100255849
vvi-u.5
for
100265515
mtr-u.5
for
11409219
ghi-r.1
for
107948294
ghi-r.1
for
107937048
ghi-r.1
for
107890949
bna-r.1
for
106349060
bna-r.1
for
106438038
bna-r.1
for
106397804
cit-r.1
for
102615821
cit-r.1
for
107178010
nta-r.1
for
107761161


Ortholog ID: 2211
Species zma zma osa tae tae hvu bdi bdi ath ath gma gma gma sly sly bra bra bra vvi vvi mtr ghi ghi ghi bna bna bna cit cit nta
Symbol LOC542280 LOC542384 LOC4338499 LOC123169149 LOC543497 LOC123441058 LOC100841330 LOC104582704 EM1 GEA6 SLE3 SLE1 SLE2 LOC101252190 LOC101247056 LOC103857913 LOC103866975 LOC103848642 LOC100255849 LOC100265515 LOC11409219 LOC107948294 LOC107937048 LOC107890949 LOC106349060 LOC106397804 LOC106437913 LOC102615821 LOC107178010 LOC107761161
Function* embryo specific protein 5 embryo specific protein 1 embryonic abundant protein 1-like em protein CS41-like em protein-like late embryogenesis abundant protein B19.1A late embryogenesis abundant protein B19.3 em protein H5 Stress induced protein Stress induced protein protein SLE3 Soybean group-1 late embryogenesis abundant protein 1 Protein SLE2 em protein H5 carrot ABA-induced in somatic embryos 3-like late seed maturation protein P8B6 late seed maturation protein P8B6 em-like protein GEA1 late embryogenesis abundant protein B19.3 protein EMB-1 protein SLE2 em protein H5 protein SLE1 protein SLE1 em-like protein GEA1 late seed maturation protein P8B6 em-like protein GEA1 protein SLE2 late embryogenesis abundant protein EMB564 em protein H5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00061 Fatty acid biosynthesis 2
vvi00620 Pyruvate metabolism 2
vvi01212 Fatty acid metabolism 2
vvi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00190 Oxidative phosphorylation 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542280 542384 4338499 123169149 543497 123441058 100841330 104582704 824344 818608 100500126 100779693 547493 101252190 101247056 103857913 103866975 103848642 100255849 100265515 11409219 107948294 107937048 107890949 106349060 106397804 106437913 102615821 107178010 107761161
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