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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   542301   histone 2B5 
 zma-u.5   542301   histone 2B5 
 zma-r.6   542301   histone 2B5 
 zma-u.5   100273491   histone H2B.4 
 zma-u.5   100273030   histone H2B.1 
 zma-u.5   100193014   histone2b 2 
 sbi-r.1   8057774   histone H2B.4 
 sbi-r.1   8071803   histone H2B.5 
 sbi-r.1   8055359   histone H2B.3 
 osa-u.5   4324500   histone H2B.7 
 osa-u.5   4324495   histone H2B.10 
 osa-u.5   4324502   histone H2B.6 
 tae-r.2   123060157   histone H2B.4-like 
 tae-r.2   123098484   histone H2B.1 
 tae-r.2   123099286   histone H2B.11 
 hvu-r.1   123440449   histone H2B.1-like 
 hvu-r.1   123439792   histone H2B.1-like 
 bdi-r.1   100846031   histone H2B.1 
 bdi-r.1   100823811   histone H2B.1 
 bdi-r.1   100841029   histone H2B.11 
 ath-u.5   HTB1   Histone superfamily protein 
 ath-u.5   HTB4   Histone superfamily protein 
 gma-u.5   100817849   probable histone H2B.1 
 gma-u.5   100820177   probable histone H2B.1 
 gma-u.5   111828532   probable histone H2B 
 sly-u.5   101267024   histone H2B.3-like 
 sly-u.5   101264987   histone H2B 
 sly-u.5   101261496   histone H2B 
 bra-r.6   103829764   histone H2B.3 
 bra-r.6   103829945   histone H2B.8 
 bra-r.6   103851535   histone H2B.7 
 vvi-u.5   100263369   histone H2B.3 
 vvi-u.5   100258812   probable histone H2B.1 
 ppo-u.5   7469475   probable histone H2B.3 
 ppo-u.5   7468455   probable histone H2B.3 
 mtr-u.5   25492556   probable histone H2B.1 
 mtr-u.5   11417139   probable histone H2B.1 
 mtr-u.5   25485824   probable histone H2B.3 
 ghi-r.1   107905251   probable histone H2B.3 
 bna-r.1   106352612   histone H2B.3 
 bna-r.1   106415829   histone H2B.11 
 bna-r.1   125608050   histone H2B.3-like 
 sot-r.1   102582527   histone H2B.3-like 
 sot-r.1   102585268   histone H2B.3-like 
 sot-r.1   102585943   histone H2B-like 
 cit-r.1   102629049   histone H2B.3 
 cit-r.1   102624126   histone H2B.4 
 cit-r.1   127902174   histone H2B.3-like 
 nta-r.1   107807323   histone H2B 
 nta-r.1   107815679   putative histone H2B.1 
 nta-r.1   107817295   histone H2B 
 cre-r.1   CHLRE_06g276900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g271376v5   uncharacterized protein 
 cre-r.1   CHLRE_06g264900v5   uncharacterized protein 

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Top 50 coexpressed genes to 542301 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542301 (zma-m.5 coexpression data)

CoexMap"542301"


zmaLOC542301 | Entrez gene ID : 542301    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 3 3 3 2 3 2 3 3 3 2 2 3 1 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (103 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (90 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (141 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein NP_001105358.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001105358.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001105358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
542301
zma-u.5
for
542301
zma-r.6
for
542301
zma-u.5
for
100273491
zma-u.5
for
100273030
zma-u.5
for
100193014
sbi-r.1
for
8057774
sbi-r.1
for
8071803
sbi-r.1
for
8055359
osa-u.5
for
4324500
osa-u.5
for
4324495
osa-u.5
for
4324502
tae-r.2
for
123060157
tae-r.2
for
123098484
tae-r.2
for
123099286
hvu-r.1
for
123440449
hvu-r.1
for
123439792
bdi-r.1
for
100846031
bdi-r.1
for
100823811
bdi-r.1
for
100841029
ath-u.5
for
HTB1
ath-u.5
for
HTB4
gma-u.5
for
100817849
gma-u.5
for
100820177
gma-u.5
for
111828532
sly-u.5
for
101267024
sly-u.5
for
101264987
sly-u.5
for
101261496
bra-r.6
for
103829764
bra-r.6
for
103829945
bra-r.6
for
103851535
vvi-u.5
for
100263369
vvi-u.5
for
100258812
ppo-u.5
for
7469475
ppo-u.5
for
7468455
mtr-u.5
for
25492556
mtr-u.5
for
11417139
mtr-u.5
for
25485824
ghi-r.1
for
107905251
bna-r.1
for
106352612
bna-r.1
for
106415829
bna-r.1
for
125608050
sot-r.1
for
102582527
sot-r.1
for
102585268
sot-r.1
for
102585943
cit-r.1
for
102629049
cit-r.1
for
102624126
cit-r.1
for
127902174
nta-r.1
for
107807323
nta-r.1
for
107815679
nta-r.1
for
107817295
cre-r.1
for
CHLRE_06g276900v5
cre-r.1
for
CHLRE_06g271376v5
cre-r.1
for
CHLRE_06g264900v5


Ortholog ID: 42
Species zma zma zma sbi sbi osa osa tae tae tae hvu hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre cre cre
Symbol LOC103639304 LOC100192792 LOC103647254 LOC8055359 LOC8072250 LOC4345904 LOC107278608 LOC123160834 LOC123143170 LOC543489 LOC123442703 LOC123442706 LOC123451652 LOC100823811 LOC100829959 LOC100844075 HTB4 AT2G28720 AT3G53650 LOC111828532 LOC100805396 LOC100499734 LOC101267024 H2B-1 LOC103829764 LOC103851535 LOC103841289 LOC100263369 LOC100251955 LOC18101340 LOC25485824 LOC11431194 LOC25492748 LOC107948824 LOC107963944 LOC107963943 LOC106347524 LOC106440705 LOC106405890 LOC102590470 LOC102601239 LOC107057692 LOC102624126 LOC102608311 LOC107804465 LOC107790383 LOC107777582 CHLRE_17g713450v5 CHLRE_17g711750v5 CHLRE_06g275800v5
Function* histone H2B.1-like Histone H2B histone H2B.5 histone H2B.3 histone H2B.1 histone H2B.2-like histone H2B.1 histone H2B.3-like histone H2B.3-like histone H2B.1-like histone H2B.4-like histone H2B.4-like histone H2B.4-like histone H2B.1 histone H2B.1 histone H2B.3 Histone superfamily protein Histone superfamily protein Histone superfamily protein probable histone H2B probable histone H2B.3 probable histone H2B.3 histone H2B.3-like histone H2B histone H2B.3 histone H2B.7 histone H2B.8 histone H2B.3 probable histone H2B.1-like probable histone H2B.3 probable histone H2B.3 probable histone H2B.3 probable histone H2B.2 histone H2B-like probable histone H2B.1 histone H2B-like histone H2B.7 histone H2B.8 histone H2B.7 histone H2B-like histone H2B histone H2B.1 histone H2B.4 histone H2B-like histone H2B histone H2B-like histone H2B.3 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00240 Pyrimidine metabolism 2
sbi00480 Glutathione metabolism 2
sbi01232 Nucleotide metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103639304 100192792 103647254 8055359 8072250 4345904 107278608 123160834 123143170 543489 123442703 123442706 123451652 100823811 100829959 100844075 836113 817421 28719403 111828532 100805396 100499734 101267024 778282 103829764 103851535 103841289 100263369 100251955 18101340 25485824 11431194 25492748 107948824 107963944 107963943 106347524 106440705 106405890 102590470 102601239 107057692 102624126 102608311 107804465 107790383 107777582 5725960 66056963 5716755
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