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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-m.5   542601   eukaryotic translation initiation factor 5A 
 zma-u.5   542601   eukaryotic translation initiation factor 5A 
 zma-r.6   542601   eukaryotic translation initiation factor 5A 
 zma-u.5   100192991   eukaryotic translation initiation factor 5A-1/2 
 zma-u.5   542537   elongation initiation factor5A 
 sbi-r.1   110431706   eukaryotic translation initiation factor 5A-like 
 sbi-r.1   110432363   eukaryotic translation initiation factor 5A-like 
 sbi-r.1   8060633   eukaryotic translation initiation factor 5A 
 osa-u.5   4334177   eukaryotic translation initiation factor 5A-2 
 osa-u.5   4342241   eukaryotic translation initiation factor 5A-4 
 osa-u.5   4352300   eukaryotic translation initiation factor 5A-2 
 tae-r.2   123102730   eukaryotic translation initiation factor 5A-4 
 tae-r.2   123044338   eukaryotic translation initiation factor 5A-2 
 tae-r.2   123045099   eukaryotic translation initiation factor 5A-1 
 hvu-r.1   123426333   eukaryotic translation initiation factor 5A-1-like 
 hvu-r.1   123425450   eukaryotic translation initiation factor 5A-like 
 bdi-r.1   100822202   eukaryotic translation initiation factor 5A-2 
 bdi-r.1   100842478   eukaryotic translation initiation factor 5A-1/2 
 ath-u.5   FBR12   Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein 
 ath-u.5   ELF5A-1   eukaryotic elongation factor 5A-1 
 ath-u.5   ELF5A-3   eukaryotic elongation factor 5A-3 
 gma-u.5   EIF5A   eukaryotic translation initiation factor 5A 
 gma-u.5   100305991   eukaryotic translation initiation factor 5A-1 
 gma-u.5   100305510   uncharacterized LOC100305510 
 sly-u.5   eIF-5A3   eukaryotic translation initiation factor 5A-3 
 sly-u.5   eIF-5A1   eukaryotic translation initiation factor 5A-1 
 sly-u.5   101250392   eukaryotic translation initiation factor 5A-3 
 bra-r.6   103835605   eukaryotic translation initiation factor 5A-2 
 bra-r.6   103831337   eukaryotic translation initiation factor 5A-3 
 bra-r.6   103840630   eukaryotic translation initiation factor 5A-2 
 vvi-u.5   100267006   eukaryotic translation initiation factor 5A 
 vvi-u.5   100247352   eukaryotic translation initiation factor 5A-2 
 vvi-u.5   100852874   eukaryotic translation initiation factor 5A-2 
 ppo-u.5   7498196   mitotic checkpoint protein BUB3.3 
 ppo-u.5   7465957   eukaryotic translation initiation factor 5A 
 ppo-u.5   7489445   eukaryotic translation initiation factor 5A 
 mtr-u.5   25494286   eukaryotic translation initiation factor 5A-2 
 mtr-u.5   25493853   eukaryotic translation initiation factor 5A-1 
 mtr-u.5   25490487   eukaryotic translation initiation factor 5A-4 
 ghi-r.1   107931501   eukaryotic translation initiation factor 5A-2 
 ghi-r.1   107918546   eukaryotic translation initiation factor 5A-2 
 ghi-r.1   107912121   eukaryotic translation initiation factor 5A 
 bna-r.1   125583599   eukaryotic translation initiation factor 5A-2-like 
 bna-r.1   106354068   eukaryotic translation initiation factor 5A-3 
 bna-r.1   125587687   eukaryotic translation initiation factor 5A-2-like 
 sot-r.1   102586869   eukaryotic translation initiation factor 5A-4-like 
 sot-r.1   102594671   eukaryotic translation initiation factor 5A-1/2-like 
 sot-r.1   102605379   eukaryotic translation initiation factor 5A-5-like 
 cit-r.1   102630849   eukaryotic translation initiation factor 5A-2 
 cit-r.1   102622877   eukaryotic translation initiation factor 5A-2 
 cit-r.1   102607046   eukaryotic translation initiation factor 5A 
 nta-r.1   107822257   eukaryotic translation initiation factor 5A-2 
 nta-r.1   107820748   eukaryotic translation initiation factor 5A-1 
 nta-r.1   107780536   eukaryotic translation initiation factor 5A-3 
 cre-r.1   CHLRE_02g097400v5   uncharacterized protein 

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Top 50 coexpressed genes to 542601 (zma-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542601 (zma-m.5 coexpression data)

CoexMap"542601"


zmaLOC542601 | Entrez gene ID : 542601    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 3 3 3 2 2 3 3 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045901 [list] [network] positive regulation of translational elongation  (4 genes)  IEA  
GO:0045905 [list] [network] positive regulation of translational termination  (5 genes)  IEA  
GO CC
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (39 genes)  IEA  
GO:0043022 [list] [network] ribosome binding  (58 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001105606.1 [sequence] [blastp]
XP_008651866.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for NP_001105606.1)
chlo 4,  cyto 4,  nucl 1,  extr 1  (predict for XP_008651866.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001105606.1)
other 8  (predict for XP_008651866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-m.5
for
542601
zma-u.5
for
542601
zma-r.6
for
542601
zma-u.5
for
100192991
zma-u.5
for
542537
sbi-r.1
for
110431706
sbi-r.1
for
110432363
sbi-r.1
for
8060633
osa-u.5
for
4334177
osa-u.5
for
4342241
osa-u.5
for
4352300
tae-r.2
for
123102730
tae-r.2
for
123044338
tae-r.2
for
123045099
hvu-r.1
for
123426333
hvu-r.1
for
123425450
bdi-r.1
for
100822202
bdi-r.1
for
100842478
ath-u.5
for
FBR12
ath-u.5
for
ELF5A-1
ath-u.5
for
ELF5A-3
gma-u.5
for
EIF5A
gma-u.5
for
100305991
gma-u.5
for
100305510
sly-u.5
for
eIF-5A3
sly-u.5
for
eIF-5A1
sly-u.5
for
101250392
bra-r.6
for
103835605
bra-r.6
for
103831337
bra-r.6
for
103840630
vvi-u.5
for
100267006
vvi-u.5
for
100247352
vvi-u.5
for
100852874
ppo-u.5
for
7498196
ppo-u.5
for
7465957
ppo-u.5
for
7489445
mtr-u.5
for
25494286
mtr-u.5
for
25493853
mtr-u.5
for
25490487
ghi-r.1
for
107931501
ghi-r.1
for
107918546
ghi-r.1
for
107912121
bna-r.1
for
125583599
bna-r.1
for
106354068
bna-r.1
for
125587687
sot-r.1
for
102586869
sot-r.1
for
102594671
sot-r.1
for
102605379
cit-r.1
for
102630849
cit-r.1
for
102622877
cit-r.1
for
102607046
nta-r.1
for
107822257
nta-r.1
for
107820748
nta-r.1
for
107780536
cre-r.1
for
CHLRE_02g097400v5


Ortholog ID: 1002
Species zma zma zma sbi sbi sbi osa osa osa tae tae hvu hvu bdi bdi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre
Symbol LOC542601 LOC100192991 LOC542537 LOC110431706 LOC110432363 LOC8060633 LOC4334177 LOC4342241 LOC4352300 LOC123102730 LOC123119905 LOC123426333 LOC123452984 LOC100822202 LOC100842478 FBR12 ELF5A-1 ELF5A-3 LOC100305991 LOC100305510 LOC100499632 eIF-5A1 LOC101250392 eIF-5A2 LOC103831337 LOC103840630 LOC103829195 LOC100267006 LOC100247352 LOC100852874 LOC7498196 LOC7465957 LOC7489445 LOC25494286 LOC25490487 LOC11413270 LOC107887366 LOC121219353 LOC107886109 LOC106358102 LOC106389545 LOC106425610 LOC102594671 LOC102605379 LOC102587998 LOC102630849 LOC102622877 LOC102607046 LOC107788880 LOC107788104 LOC107823125 CHLRE_02g097400v5
Function* eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-1/2 elongation initiation factor5A eukaryotic translation initiation factor 5A-like eukaryotic translation initiation factor 5A-like eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-4 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-4 eukaryotic translation initiation factor 5A-4 eukaryotic translation initiation factor 5A-1-like eukaryotic translation initiation factor 5A-4 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-1/2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein eukaryotic elongation factor 5A-1 eukaryotic elongation factor 5A-3 eukaryotic translation initiation factor 5A-1 uncharacterized LOC100305510 eukaryotic translation initiation factor 5A3 eukaryotic translation initiation factor 5A-1 eukaryotic translation initiation factor 5A-3 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-3 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 mitotic checkpoint protein BUB3.3 eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-4 eukaryotic translation initiation factor 5A-5 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-1/2-like eukaryotic translation initiation factor 5A-5-like eukaryotic translation initiation factor 5A-4-like eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A-2 eukaryotic translation initiation factor 5A eukaryotic translation initiation factor 5A-1/2-like eukaryotic translation initiation factor 5A-3 eukaryotic translation initiation factor 5A-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00020 Citrate cycle (TCA cycle) 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03015 mRNA surveillance pathway 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03040 Spliceosome 2
hvu03083 Polycomb repressive complex 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00190 Oxidative phosphorylation 2
mtr00480 Glutathione metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 8
ghi04075 Plant hormone signal transduction 8
ghi04626 Plant-pathogen interaction 8
ghi04070 Phosphatidylinositol signaling system 6
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03250 Viral life cycle - HIV-1 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03083 Polycomb repressive complex 3
sot04120 Ubiquitin mediated proteolysis 3
sot00270 Cysteine and methionine metabolism 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot04141 Protein processing in endoplasmic reticulum 5
sot03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta04145 Phagosome 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta04145 Phagosome 7
nta04141 Protein processing in endoplasmic reticulum 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01210 2-Oxocarboxylic acid metabolism 3
cre01230 Biosynthesis of amino acids 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542601 100192991 542537 110431706 110432363 8060633 4334177 4342241 4352300 123102730 123119905 123426333 123452984 100822202 100842478 839203 837955 843273 100305991 100305510 100499632 543667 101250392 543668 103831337 103840630 103829195 100267006 100247352 100852874 7498196 7465957 7489445 25494286 25490487 11413270 107887366 121219353 107886109 106358102 106389545 106425610 102594671 102605379 102587998 102630849 102622877 102607046 107788880 107788104 107823125 5725597
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