ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-r.6	100191202	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
zma-u.5	100191202	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
sbi-r.1	8085423	uncharacterized LOC8085423
osa-u.5	4327429	2-oxoglutarate-dependent dioxygenase DAO
hvu-r.1	123440568	uncharacterized LOC123440568
bdi-r.1	100825187	2-oxoglutarate-dependent dioxygenase DAO
gma-u.5	100785042	1-aminocyclopropane-1-carboxylate oxidase 2
sly-u.5	101250999	1-aminocyclopropane-1-carboxylate oxidase
bra-r.6	103847069	uncharacterized LOC103847069
vvi-u.5	100245010	gibberellin 2-beta-dioxygenase 1
ppo-u.5	7488027	gibberellin 2-beta-dioxygenase 1
mtr-u.5	11431146	gibberellin 2-beta-dioxygenase 1
ghi-r.1	121212151	gibberellin 2-beta-dioxygenase 4
ghi-r.1	107918498	uncharacterized LOC107918498
bna-r.1	125584501	uncharacterized LOC125584501
bna-r.1	106433270	uncharacterized LOC106433270
sot-r.1	102596265	1-aminocyclopropane-1-carboxylate oxidase
cit-r.1	102626725	gibberellin 2-beta-dioxygenase 2
nta-r.1	107792927	gibberellin 2-beta-dioxygenase 2-like
nta-r.1	107780033	gibberellin 2-beta-dioxygenase 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001130109.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_001130109.1)

Subcellular
localization
TargetP

chlo 8, other 3

(predict for NP_001130109.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100191202	zma-u.5 for 100191202	sbi-r.1 for 8085423	osa-u.5 for 4327429	hvu-r.1 for 123440568	bdi-r.1 for 100825187	gma-u.5 for 100785042	sly-u.5 for 101250999	bra-r.6 for 103847069	vvi-u.5 for 100245010	ppo-u.5 for 7488027	mtr-u.5 for 11431146	ghi-r.1 for 121212151	ghi-r.1 for 107918498	bna-r.1 for 125584501	bna-r.1 for 106433270	sot-r.1 for 102596265	cit-r.1 for 102626725	nta-r.1 for 107792927	nta-r.1 for 107780033

Ortholog

Ortholog ID: 11293

Species

zma

sbi

osa

hvu

bdi

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

uncharacterized LOC8085423

2-oxoglutarate-dependent dioxygenase DAO

uncharacterized LOC123440568

2-oxoglutarate-dependent dioxygenase DAO

1-aminocyclopropane-1-carboxylate oxidase 2

1-aminocyclopropane-1-carboxylate oxidase

uncharacterized LOC103847069

gibberellin 2-beta-dioxygenase 1

gibberellin 2-beta-dioxygenase 4

uncharacterized LOC107918498

uncharacterized LOC125584501

uncharacterized LOC106433270

1-aminocyclopropane-1-carboxylate oxidase

gibberellin 2-beta-dioxygenase 2

gibberellin 2-beta-dioxygenase 2-like

gibberellin 2-beta-dioxygenase 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00450	Selenocompound metabolism	3
osa00270	Cysteine and methionine metabolism	2
osa01230	Biosynthesis of amino acids	2
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma04075	Plant hormone signal transduction	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	5
sly00030	Pentose phosphate pathway	4
sly01230	Biosynthesis of amino acids	4
sly00710	Carbon fixation by Calvin cycle	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00940	Phenylpropanoid biosynthesis	3
vvi00941	Flavonoid biosynthesis	2
vvi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
vvi00541	Biosynthesis of various nucleotide sugars	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	4
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4
ghi04981	Folate transport and metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2
ghi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta00906	Carotenoid biosynthesis	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2
nta03030	DNA replication	2

Expression

Expression pattern

Entrez Gene ID^*

100191202

8085423

4327429

123440568

100825187

100785042

101250999

103847069

100245010

7488027

11431146

121212151

107918498

125584501

106433270

102596265

102626725

107792927

107780033

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100191202 (zma-r.6 coexpression data)

Top 50 enrichment test to 100191202 (zma-r.6 coexpression data)


Species	zma	sbi	osa	hvu	bdi	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	tae	ath
Paralog	2	1	1	1	1	1	1	1	1	1	1	2	2	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100191202 (zma-r.6 coexpression data)

Top 50 enrichment test to 100191202 (zma-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**