ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-r.6	100192529	uncharacterized LOC100192529
zma-u.5	100192529	uncharacterized LOC100192529
osa-u.5	4339233	uncharacterized LOC4339233
hvu-r.1	123443439	uncharacterized LOC123443439
bdi-r.1	100842329	uncharacterized LOC100842329
gma-u.5	100818603	uncharacterized LOC100818603
gma-u.5	100779766	uncharacterized LOC100779766
sly-u.5	101268647	uncharacterized LOC101268647
sly-u.5	101253848	uncharacterized LOC101253848
bra-r.6	103861649	uncharacterized LOC103861649
vvi-u.5	100243023	uncharacterized LOC100243023
ppo-u.5	7458837	uncharacterized LOC7458837
ppo-u.5	7464710	uncharacterized LOC7464710
mtr-u.5	25492107	uncharacterized LOC25492107
ghi-r.1	107910834	uncharacterized LOC107910834
ghi-r.1	107927046	uncharacterized LOC107927046
ghi-r.1	107914105	uncharacterized LOC107914105
bna-r.1	BNAC07G40590D	uncharacterized BNAC07G40590D
sot-r.1	107060559	uncharacterized LOC107060559
cit-r.1	102627610	uncharacterized LOC102627610
nta-r.1	107785929	uncharacterized LOC107785929

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity

(160 genes)

IEA

Protein

NP_001131220.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 3, nucl 1, plas 1, vacu 1, E.R. 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1

(predict for NP_001131220.1)

Subcellular
localization
TargetP

other 4, chlo 3

(predict for NP_001131220.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100192529	zma-u.5 for 100192529	osa-u.5 for 4339233	hvu-r.1 for 123443439	bdi-r.1 for 100842329	gma-u.5 for 100818603	gma-u.5 for 100779766	sly-u.5 for 101268647	sly-u.5 for 101253848	bra-r.6 for 103861649	vvi-u.5 for 100243023	ppo-u.5 for 7458837	ppo-u.5 for 7464710	mtr-u.5 for 25492107	ghi-r.1 for 107910834	ghi-r.1 for 107927046	ghi-r.1 for 107914105	bna-r.1 for BNAC07G40590D	sot-r.1 for 107060559	cit-r.1 for 102627610	nta-r.1 for 107785929

Ortholog

Ortholog ID: 3545

Species

zma

osa

hvu

bdi

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

Symbol

Function^*

uncharacterized LOC100192529

uncharacterized LOC103649812

uncharacterized LOC4339233

uncharacterized LOC123443439

uncharacterized LOC100842329

uncharacterized LOC100818603

uncharacterized LOC100779766

uncharacterized LOC101268647

uncharacterized LOC101253848

uncharacterized LOC103861649

uncharacterized LOC100243023

uncharacterized LOC7458837

uncharacterized LOC7464710

uncharacterized LOC25492107

uncharacterized LOC107927046

uncharacterized LOC121217119

uncharacterized LOC107887975

uncharacterized BNAC07G40590D

uncharacterized LOC107060559

uncharacterized LOC102627610

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	4
zma00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	2
bna03272	Virion - Hepatitis viruses	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

100192529

103649812

4339233

123443439

100842329

100818603

100779766

101268647

101253848

103861649

100243023

7458837

7464710

25492107

107927046

121217119

107887975

106409058

107060559

102627610

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100192529 (zma-r.6 coexpression data)

Top 50 enrichment test to 100192529 (zma-r.6 coexpression data)


Species	zma	osa	hvu	bdi	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	tae	sbi	ath
Paralog	2	1	1	1	2	2	1	1	2	1	3	1	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192529 (zma-r.6 coexpression data)

Top 50 enrichment test to 100192529 (zma-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**