ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	100193003	uncharacterized LOC100193003
zma-u.5	100193003	uncharacterized LOC100193003
zma-u.5	100217001	Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
sbi-r.1	110433830	uncharacterized LOC110433830
osa-u.5	4338101	uncharacterized LOC4338101
osa-u.5	4324644	uncharacterized LOC4324644
tae-r.2	123077788	uncharacterized LOC123077788
tae-r.2	123060703	uncharacterized LOC123060703
tae-r.2	123069269	uncharacterized LOC123069269
hvu-r.1	123443185	uncharacterized LOC123443185
hvu-r.1	123442879	uncharacterized LOC123442879
bdi-r.1	100838575	uncharacterized LOC100838575
bdi-r.1	100830096	uncharacterized LOC100830096
ath-u.5	AT2G46420	helicase with zinc finger protein
ath-u.5	AT3G61700	helicase with zinc finger protein
gma-u.5	100809202	uncharacterized LOC100809202
gma-u.5	100809603	uncharacterized LOC100809603
gma-u.5	100791101	uncharacterized LOC100791101
sly-u.5	101262308	uncharacterized LOC101262308
sly-u.5	101254226	uncharacterized LOC101254226
bra-r.6	103866469	uncharacterized LOC103866469
vvi-u.5	100264107	uncharacterized LOC100264107
vvi-u.5	100265382	uncharacterized LOC100265382
ppo-u.5	7494148	uncharacterized LOC7494148
ppo-u.5	7497245	uncharacterized LOC7497245
mtr-u.5	25500708	uncharacterized LOC25500708
ghi-r.1	107945858	uncharacterized LOC107945858
ghi-r.1	107948180	uncharacterized LOC107948180
ghi-r.1	107938162	uncharacterized LOC107938162
bna-r.1	BNAA07G18970D	uncharacterized BNAA07G18970D
bna-r.1	111215540	uncharacterized LOC111215540
bna-r.1	BNAC04G01240D	uncharacterized BNAC04G01240D
sot-r.1	102583277	uncharacterized LOC102583277
sot-r.1	102588859	uncharacterized LOC102588859
cit-r.1	127898617	uncharacterized LOC127898617
cit-r.1	102618295	hypothetical protein
nta-r.1	107809938	uncharacterized LOC107809938
nta-r.1	107813018	uncharacterized LOC107813018
nta-r.1	107805763	uncharacterized LOC107805763

Top 50 coexpressed genes to 100193003 (zma-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100193003 (zma-r.6 coexpression data)

CoexMap"100193003"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001131644.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, nucl_plas 4, cyto 1, plas 1, extr 1, pero 1, cyto_E.R. 1

(predict for NP_001131644.1)

Subcellular
localization
TargetP

other 9

(predict for NP_001131644.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100193003	zma-u.5 for 100193003	zma-u.5 for 100217001	sbi-r.1 for 110433830	osa-u.5 for 4338101	osa-u.5 for 4324644	tae-r.2 for 123077788	tae-r.2 for 123060703	tae-r.2 for 123069269	hvu-r.1 for 123443185	hvu-r.1 for 123442879	bdi-r.1 for 100838575	bdi-r.1 for 100830096	ath-u.5 for AT2G46420	ath-u.5 for AT3G61700	gma-u.5 for 100809202	gma-u.5 for 100809603	gma-u.5 for 100791101	sly-u.5 for 101262308	sly-u.5 for 101254226	bra-r.6 for 103866469	vvi-u.5 for 100264107	vvi-u.5 for 100265382	ppo-u.5 for 7494148	ppo-u.5 for 7497245	mtr-u.5 for 25500708	ghi-r.1 for 107945858	ghi-r.1 for 107948180	ghi-r.1 for 107938162	bna-r.1 for BNAA07G18970D	bna-r.1 for 111215540	bna-r.1 for BNAC04G01240D	sot-r.1 for 102583277	sot-r.1 for 102588859	cit-r.1 for 127898617	cit-r.1 for 102618295	nta-r.1 for 107809938	nta-r.1 for 107813018	nta-r.1 for 107805763

Ortholog

Ortholog ID: 3787

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100193003

Ectonucleotide pyrophosphatase/phosphodiesterase family member 3

uncharacterized LOC110433830

uncharacterized LOC4338101

uncharacterized LOC4324644

uncharacterized LOC123077788

uncharacterized LOC123060703

uncharacterized LOC123069269

uncharacterized LOC123443185

uncharacterized LOC123442879

uncharacterized LOC100838575

uncharacterized LOC100830096

helicase with zinc finger protein

uncharacterized LOC100809202

uncharacterized LOC100809603

uncharacterized LOC100791101

uncharacterized LOC101262308

uncharacterized LOC101254226

uncharacterized LOC103866469

uncharacterized LOC100264107

uncharacterized LOC100265382

uncharacterized LOC7494148

uncharacterized LOC7497245

uncharacterized LOC25500708

uncharacterized LOC107924334

uncharacterized LOC107916605

uncharacterized LOC107900944

uncharacterized BNAA07G18970D

uncharacterized LOC111215540

uncharacterized LOC106411610

uncharacterized LOC102583277

uncharacterized LOC102588859

uncharacterized LOC127898617

hypothetical protein

uncharacterized LOC107809938

uncharacterized LOC107805763

uncharacterized LOC107798821

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00730	Thiamine metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	6
tae01232	Nucleotide metabolism	6
tae00240	Pyrimidine metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00740	Riboflavin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	6
tae01232	Nucleotide metabolism	6
tae00240	Pyrimidine metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00740	Riboflavin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	6
tae01232	Nucleotide metabolism	6
tae00240	Pyrimidine metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00740	Riboflavin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi00020	Citrate cycle (TCA cycle)	2
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	3
ath00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2
gma03420	Nucleotide excision repair	2
gma04120	Ubiquitin mediated proteolysis	2
gma00500	Starch and sucrose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	7
gma00100	Steroid biosynthesis	3
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00941	Flavonoid biosynthesis	2
sly00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	4
bra00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	2
ppo00541	Biosynthesis of various nucleotide sugars	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00340	Histidine metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	4
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	2
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	2
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2
nta04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

100193003

100217001

110433830

4338101

4324644

123077788

123060703

123069269

123443185

123442879

100838575

100830096

819250

825343

100809202

100809603

100791101

101262308

101254226

103866469

100264107

100265382

7494148

7497245

25500708

107924334

107916605

107900944

106353283

111215540

106411610

102583277

102588859

127898617

102618295

107809938

107805763

107798821

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	2	3	2	2	2	3	2	1	2	2	1	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100193003 (zma-r.6 coexpression data)

Top 50 enrichment test to 100193003 (zma-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**