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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   100277474   putative RING zinc finger domain superfamily protein 
 zma-u.5   100277474   putative RING zinc finger domain superfamily protein 
 zma-u.5   100276421   GW2 
 sbi-r.1   110435364   uncharacterized LOC110435364 
 sbi-r.1   8071338   uncharacterized LOC8071338 
 sbi-r.1   8085584   uncharacterized LOC8085584 
 osa-u.5   4328856   E3 ubiquitin-protein ligase GW2 
 osa-u.5   4340173   E3 ubiquitin-protein ligase GW2 
 tae-r.2   123150689   E3 ubiquitin-protein ligase DA2L 
 tae-r.2   123144446   E3 ubiquitin-protein ligase GW2 
 tae-r.2   123137004   E3 ubiquitin-protein ligase GW2 
 hvu-r.1   123401431   E3 ubiquitin-protein ligase GW2 
 hvu-r.1   123409464   E3 ubiquitin-protein ligase DA2L-like 
 bdi-r.1   100834478   protein sip5 
 bdi-r.1   100842868   uncharacterized LOC100842868 
 ath-u.5   AT1G17145   RING/U-box superfamily protein 
 ath-u.5   AT1G78420   RING/U-box superfamily protein 
 gma-u.5   100817758   E3 ubiquitin-protein ligase DA2L 
 gma-u.5   100816142   E3 ubiquitin-protein ligase DA2L 
 sly-u.5   101267326   E3 ubiquitin-protein ligase DA2L 
 bra-r.6   103872500   E3 ubiquitin-protein ligase DA2L 
 bra-r.6   103853127   E3 ubiquitin-protein ligase DA2 
 bra-r.6   103832322   E3 ubiquitin-protein ligase DA2 
 vvi-u.5   100256555   E3 ubiquitin-protein ligase DA2 
 ppo-u.5   7471890   E3 ubiquitin-protein ligase DA2L 
 ppo-u.5   7459113   E3 ubiquitin-protein ligase DA2L 
 mtr-u.5   25487074   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107936183   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107932690   E3 ubiquitin-protein ligase DA2L 
 ghi-r.1   107920435   E3 ubiquitin-protein ligase DA2L 
 bna-r.1   106354697   E3 ubiquitin-protein ligase DA2-like 
 bna-r.1   BNAC06G38900D   E3 ubiquitin-protein ligase DA2 
 bna-r.1   106346715   E3 ubiquitin-protein ligase DA2L 
 sot-r.1   102601386   uncharacterized LOC102601386 
 cit-r.1   102626199   E3 ubiquitin-protein ligase DA2L 
 nta-r.1   107767158   E3 ubiquitin-protein ligase DA2L-like 
 nta-r.1   107820265   E3 ubiquitin-protein ligase DA2L 
 cre-r.1   CHLRE_26g756897v5   uncharacterized protein 

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Top 50 coexpressed genes to 100277474 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100277474 (zma-r.6 coexpression data)

CoexMap"100277474"


zmaLOC100277474 | Entrez gene ID : 100277474      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 3 2 2 2 2 1 3 1 2 1 3 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
Protein NP_001144494.2 [sequence] [blastp]
NP_001394187.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001144494.2)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001394187.1)
Subcellular
localization
TargetP
other 9,  mito 4  (predict for NP_001144494.2)
other 9,  mito 4  (predict for NP_001394187.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
100277474
zma-u.5
for
100277474
zma-u.5
for
100276421
sbi-r.1
for
110435364
sbi-r.1
for
8071338
sbi-r.1
for
8085584
osa-u.5
for
4328856
osa-u.5
for
4340173
tae-r.2
for
123150689
tae-r.2
for
123144446
tae-r.2
for
123137004
hvu-r.1
for
123401431
hvu-r.1
for
123409464
bdi-r.1
for
100834478
bdi-r.1
for
100842868
ath-u.5
for
AT1G17145
ath-u.5
for
AT1G78420
gma-u.5
for
100817758
gma-u.5
for
100816142
sly-u.5
for
101267326
bra-r.6
for
103872500
bra-r.6
for
103853127
bra-r.6
for
103832322
vvi-u.5
for
100256555
ppo-u.5
for
7471890
ppo-u.5
for
7459113
mtr-u.5
for
25487074
ghi-r.1
for
107936183
ghi-r.1
for
107932690
ghi-r.1
for
107920435
bna-r.1
for
106354697
bna-r.1
for
BNAC06G38900D
bna-r.1
for
106346715
sot-r.1
for
102601386
cit-r.1
for
102626199
nta-r.1
for
107767158
nta-r.1
for
107820265
cre-r.1
for
CHLRE_26g756897v5


Ortholog ID: 2519
Species zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100275385 LOC110435364 LOC8085584 LOC4328856 LOC4340173 LOC123150689 LOC123165337 LOC123409464 LOC123448439 LOC100834478 LOC100842868 AT1G17145 AT1G78420 LOC100817758 LOC100816142 LOC101267326 LOC103872500 LOC103853127 LOC103832322 LOC100256555 LOC7471890 LOC7459113 LOC25487074 LOC107932690 LOC107920435 LOC107904003 LOC106354697 BNAC06G38900D LOC106447227 LOC102601386 LOC102626199 LOC107767158 LOC107820265 CHLRE_26g756897v5
Function* uncharacterized LOC100275385 uncharacterized LOC110435364 uncharacterized LOC8085584 E3 ubiquitin-protein ligase GW2 E3 ubiquitin-protein ligase GW2 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase GW2 E3 ubiquitin-protein ligase DA2L-like E3 ubiquitin-protein ligase DA2-like protein sip5 uncharacterized LOC100842868 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2-like E3 ubiquitin-protein ligase DA2 E3 ubiquitin-protein ligase DA2L uncharacterized LOC102601386 E3 ubiquitin-protein ligase DA2L E3 ubiquitin-protein ligase DA2L-like E3 ubiquitin-protein ligase DA2L uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00592 alpha-Linolenic acid metabolism 2
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04130 SNARE interactions in vesicular transport 3
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04130 SNARE interactions in vesicular transport 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100275385 110435364 8085584 4328856 4340173 123150689 123165337 123409464 123448439 100834478 100842868 838285 844178 100817758 100816142 101267326 103872500 103853127 103832322 100256555 7471890 7459113 25487074 107932690 107920435 107904003 106354697 106354556 106447227 102601386 102626199 107767158 107820265 5727786
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