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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   100280682   uncharacterized LOC100280682 
 zma-u.5   100280682   uncharacterized LOC100280682 
 zma-u.5   100272731   Pentatricopeptide repeat-containing protein 
 zma-u.5   103626085   pentatricopeptide repeat-containing protein At1g09900 
 sbi-r.1   8065648   pentatricopeptide repeat-containing protein At1g09900 
 sbi-r.1   8080368   peptidyl-prolyl cis-trans isomerase FKBP53 
 osa-u.5   4333282   pentatricopeptide repeat-containing protein At1g09900 
 tae-r.2   123053429   pentatricopeptide repeat-containing protein At1g09900 
 tae-r.2   123189335   pentatricopeptide repeat-containing protein At1g09900 
 tae-r.2   123098676   pentatricopeptide repeat-containing protein At1g09900 
 hvu-r.1   123430340   pentatricopeptide repeat-containing protein At1g09900-like 
 hvu-r.1   123447114   pentatricopeptide repeat-containing protein At1g09900-like 
 bdi-r.1   100828265   pentatricopeptide repeat-containing protein At1g09900 

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Top 50 coexpressed genes to 100280682 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280682 (zma-r.6 coexpression data)

CoexMap"100280682"


zmaLOC100280682 | Entrez gene ID : 100280682    
Species zma sbi osa tae hvu bdi gma bna mtr nta vvi ath sot bra cit ghi ppo sly cre
Paralog 4 2 1 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001241831.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001241831.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001241831.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
100280682
zma-u.5
for
100280682
zma-u.5
for
100272731
zma-u.5
for
103626085
sbi-r.1
for
8065648
sbi-r.1
for
8080368
osa-u.5
for
4333282
tae-r.2
for
123053429
tae-r.2
for
123189335
tae-r.2
for
123098676
hvu-r.1
for
123430340
hvu-r.1
for
123447114
bdi-r.1
for
100828265


Ortholog ID: 13272
Species zma zma zma sbi sbi osa tae tae tae hvu hvu bdi
Symbol LOC100280682 LOC100272731 LOC103626085 LOC8065648 LOC8080368 LOC4333282 LOC123053429 LOC123189335 LOC123098676 LOC123430340 LOC123447114 LOC100828265
Function* uncharacterized LOC100280682 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 peptidyl-prolyl cis-trans isomerase FKBP53 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100280682 100272731 103626085 8065648 8080368 4333282 123053429 123189335 123098676 123430340 123447114 100828265
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