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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   100281205   pre-mRNA-processing ATP-dependent RNA helicase prp-5 
 zma-u.5   100281205   pre-mRNA-processing ATP-dependent RNA helicase prp-5 
 zma-u.5   103634567   DEAD-box ATP-dependent RNA helicase 24 
 osa-u.5   4332617   DEAD-box ATP-dependent RNA helicase 24-like 
 ath-u.5   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100814854   DEAD-box ATP-dependent RNA helicase 24 
 gma-u.5   100805571   DEAD-box ATP-dependent RNA helicase 24 
 sly-u.5   101264757   DEAD-box ATP-dependent RNA helicase 24 
 vvi-u.5   100241725   DEAD-box ATP-dependent RNA helicase 24 
 ppo-u.5   7460468   DEAD-box ATP-dependent RNA helicase 24 
 mtr-u.5   11432035   DEAD-box ATP-dependent RNA helicase 24 

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Top 50 coexpressed genes to 100281205 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100281205 (zma-r.6 coexpression data)

CoexMap"100281205"


zmaLOC100281205 | Entrez gene ID : 100281205      
Species zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (80 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein NP_001147596.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  chlo_mito 3  (predict for NP_001147596.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001147596.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
100281205

.
zma-u.5
for
100281205

.
zma-u.5
for
103634567

.
osa-u.5
for
4332617

.
ath-u.5
for
AT2G47330

.
gma-u.5
for
100814854

.
gma-u.5
for
100805571

.
sly-u.5
for
101264757

.
vvi-u.5
for
100241725

.
ppo-u.5
for
7460468

.
mtr-u.5
for
11432035

.


Ortholog ID: 6851
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G47330 LOC100814854 LOC100805571 LOC101264757 LOC4332617 LOC100281205 LOC103634567 LOC103866389 LOC103860073 LOC100241725 LOC7460468 LOC11432035 LOC123097670 LOC123085675 LOC123448815 LOC123448817 LOC107917092 LOC107917120 LOC106351504 LOC106438322 CHLRE_12g522850v5 LOC8081075 LOC102596658 LOC102609265 LOC100831375 LOC107807048 LOC107792463
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24-like pre-mRNA-processing ATP-dependent RNA helicase prp-5 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24-like uncharacterized protein DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03083 Polycomb repressive complex 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819346 100814854 100805571 101264757 4332617 100281205 103634567 103866389 103860073 100241725 7460468 11432035 123097670 123085675 123448815 123448817 107917092 107917120 106351504 106438322 5722547 8081075 102596658 102609265 100831375 107807048 107792463
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