ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-r.6	100282988	protein kinase APK1A
zma-u.5	100282988	protein kinase APK1A
zma-m.5	100282988	protein kinase APK1A
zma-u.5	100285589	uncharacterized LOC100285589
zma-u.5	100274061	putative protein kinase superfamily protein
zma-u.5	100283086	uncharacterized LOC100283086
sbi-r.1	8068666	probable serine/threonine-protein kinase PBL11
sbi-r.1	8057041	probable serine/threonine-protein kinase PBL10
osa-u.5	4332405	receptor-like cytoplasmic kinase 176
osa-u.5	4326402	receptor-like cytoplasmic kinase 176
osa-u.5	4334605	receptor-like cytoplasmic kinase 176
tae-r.2	123081008	receptor-like cytoplasmic kinase 176
tae-r.2	123114001	receptor-like cytoplasmic kinase 176
tae-r.2	123063700	receptor-like cytoplasmic kinase 176
hvu-r.1	123398743	serine/threonine-protein kinase PCRK1-like
hvu-r.1	123442184	receptor-like cytoplasmic kinase 176
bdi-r.1	100830970	receptor-like cytoplasmic kinase 176
bdi-r.1	100836500	receptor-like cytoplasmic kinase 176
ath-u.5	PK1B	protein kinase 1B
ath-u.5	BIK1	botrytis-induced kinase1
ath-u.5	NAK	Protein kinase superfamily protein
gma-u.5	100775335	receptor-like cytoplasmic kinase 176
gma-u.5	100305440	protein kinase
gma-u.5	100788856	protein kinase APK1A, chloroplastic-like
sly-u.5	101260038	probable serine/threonine-protein kinase PBL9
sly-u.5	101252213	receptor-like cytoplasmic kinase 176
sly-u.5	TPK1b	protein kinase 1b
bra-r.6	103864931	probable serine/threonine-protein kinase PBL10
bra-r.6	103865732	serine/threonine-protein kinase BIK1
bra-r.6	103867025	serine/threonine-protein kinase BIK1
vvi-u.5	100246192	receptor-like cytoplasmic kinase 176
vvi-u.5	100251053	receptor-like cytoplasmic kinase 176
vvi-u.5	100253466	probable serine/threonine-protein kinase PBL9
ppo-u.5	7481536	probable serine/threonine-protein kinase PBL9
ppo-u.5	7458144	receptor-like cytoplasmic kinase 176
ppo-u.5	7485703	probable serine/threonine-protein kinase PBL10
mtr-u.5	25498476	receptor-like cytoplasmic kinase 176
mtr-u.5	11433182	receptor-like cytoplasmic kinase 176
mtr-u.5	25487888	probable serine/threonine-protein kinase PBL9
ghi-r.1	107889686	receptor-like cytoplasmic kinase 176
ghi-r.1	107891055	receptor-like cytoplasmic kinase 176
ghi-r.1	107904729	probable serine/threonine-protein kinase PBL9
bna-r.1	106448897	probable serine/threonine-protein kinase PBL11
bna-r.1	106433548	probable serine/threonine-protein kinase PBL11
bna-r.1	106429070	probable serine/threonine-protein kinase PBL11
sot-r.1	102586923	protein kinase APK1A, chloroplastic
sot-r.1	102594269	probable serine/threonine-protein kinase NAK
sot-r.1	102602779	protein kinase APK1B, chloroplastic-like
cit-r.1	102630673	probable serine/threonine-protein kinase PBL11
cit-r.1	102626042	receptor-like cytoplasmic kinase 176
cit-r.1	102620394	probable serine/threonine-protein kinase PBL9
nta-r.1	107802098	receptor-like cytoplasmic kinase 176
nta-r.1	107765422	putative serine/threonine-protein kinase PBL11
nta-r.1	107778835	putative serine/threonine-protein kinase PBL11

Top 50 coexpressed genes to 100282988 (zma-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100282988 (zma-r.6 coexpression data)

CoexMap"100282988"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1372 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(1410 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2473 genes)	IEA

Protein

NP_001149364.1 [sequence] [blastp]
XP_008677038.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4, chlo 1, plas 1	(predict for NP_001149364.1)
nucl 5, cyto 3, cysk_nucl 3	(predict for XP_008677038.1)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001149364.1)
chlo 9	(predict for XP_008677038.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-r.6 for 100282988	zma-u.5 for 100282988	zma-m.5 for 100282988	zma-u.5 for 100285589	zma-u.5 for 100274061	zma-u.5 for 100283086	sbi-r.1 for 8068666	sbi-r.1 for 8057041	osa-u.5 for 4332405	osa-u.5 for 4326402	osa-u.5 for 4334605	tae-r.2 for 123081008	tae-r.2 for 123114001	tae-r.2 for 123063700	hvu-r.1 for 123398743	hvu-r.1 for 123442184	bdi-r.1 for 100830970	bdi-r.1 for 100836500	ath-u.5 for PK1B	ath-u.5 for BIK1	ath-u.5 for NAK	gma-u.5 for 100775335	gma-u.5 for 100305440	gma-u.5 for 100788856	sly-u.5 for 101260038	sly-u.5 for 101252213	sly-u.5 for TPK1b	bra-r.6 for 103864931	bra-r.6 for 103865732	bra-r.6 for 103867025	vvi-u.5 for 100246192	vvi-u.5 for 100251053	vvi-u.5 for 100253466	ppo-u.5 for 7481536	ppo-u.5 for 7458144	ppo-u.5 for 7485703	mtr-u.5 for 25498476	mtr-u.5 for 11433182	mtr-u.5 for 25487888	ghi-r.1 for 107889686	ghi-r.1 for 107891055	ghi-r.1 for 107904729	bna-r.1 for 106448897	bna-r.1 for 106433548	bna-r.1 for 106429070	sot-r.1 for 102586923	sot-r.1 for 102594269	sot-r.1 for 102602779	cit-r.1 for 102630673	cit-r.1 for 102626042	cit-r.1 for 102620394	nta-r.1 for 107802098	nta-r.1 for 107765422	nta-r.1 for 107778835

Ortholog

Ortholog ID: 485

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

PK1B

BIK1

NAK

Function^*

protein kinase APK1A

uncharacterized LOC100279389

probable serine/threonine-protein kinase PBL11

probable serine/threonine-protein kinase PBL10